Protein–RNA interactions for Protein: O15049

N4BP3, NEDD4-binding protein 3, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP3O15049 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
N4BP3O15049 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
N4BP3O15049 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
N4BP3O15049 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
N4BP3O15049 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
N4BP3O15049 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.07■■■□□ 2.56
N4BP3O15049 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.07■■■□□ 2.56
N4BP3O15049 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
N4BP3O15049 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
N4BP3O15049 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.06■■■□□ 2.56
N4BP3O15049 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
N4BP3O15049 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.04■■■□□ 2.56
N4BP3O15049 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
N4BP3O15049 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.01■■■□□ 2.55
N4BP3O15049 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
N4BP3O15049 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
N4BP3O15049 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.97■■■□□ 2.55
N4BP3O15049 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
N4BP3O15049 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
N4BP3O15049 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.96■■■□□ 2.55
N4BP3O15049 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
N4BP3O15049 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.95■■■□□ 2.55
N4BP3O15049 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
N4BP3O15049 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
N4BP3O15049 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.93■■■□□ 2.54
N4BP3O15049 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
N4BP3O15049 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
N4BP3O15049 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
N4BP3O15049 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
N4BP3O15049 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.87■■■□□ 2.53
N4BP3O15049 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
N4BP3O15049 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.85■■■□□ 2.53
N4BP3O15049 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.85■■■□□ 2.53
N4BP3O15049 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
N4BP3O15049 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
N4BP3O15049 RARRES2P7-201ENST00000567349 469 ntBASIC30.81■■■□□ 2.52
N4BP3O15049 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.81■■■□□ 2.52
N4BP3O15049 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
N4BP3O15049 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
N4BP3O15049 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC30.8■■■□□ 2.52
N4BP3O15049 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
N4BP3O15049 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.79■■■□□ 2.52
N4BP3O15049 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
N4BP3O15049 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
N4BP3O15049 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
N4BP3O15049 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
N4BP3O15049 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.76■■■□□ 2.51
N4BP3O15049 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.75■■■□□ 2.51
N4BP3O15049 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
N4BP3O15049 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.72■■■□□ 2.51
N4BP3O15049 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
N4BP3O15049 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.7■■■□□ 2.51
N4BP3O15049 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
N4BP3O15049 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
N4BP3O15049 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
N4BP3O15049 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
N4BP3O15049 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.68■■■□□ 2.5
N4BP3O15049 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
N4BP3O15049 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
N4BP3O15049 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.67■■■□□ 2.5
N4BP3O15049 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.65■■■□□ 2.5
N4BP3O15049 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
N4BP3O15049 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
N4BP3O15049 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
N4BP3O15049 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
N4BP3O15049 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
N4BP3O15049 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
N4BP3O15049 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
N4BP3O15049 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.62■■■□□ 2.49
N4BP3O15049 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.61■■■□□ 2.49
N4BP3O15049 SETD8P1-201ENST00000623146 1180 ntBASIC30.6■■■□□ 2.49
N4BP3O15049 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
N4BP3O15049 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
N4BP3O15049 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
N4BP3O15049 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
N4BP3O15049 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
N4BP3O15049 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
N4BP3O15049 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
N4BP3O15049 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.56■■■□□ 2.48
N4BP3O15049 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.55■■■□□ 2.48
N4BP3O15049 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.54■■■□□ 2.48
N4BP3O15049 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
N4BP3O15049 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
N4BP3O15049 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
N4BP3O15049 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
N4BP3O15049 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
N4BP3O15049 AC097358.2-201ENST00000607541 1159 ntBASIC30.49■■■□□ 2.47
N4BP3O15049 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.47■■■□□ 2.47
N4BP3O15049 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
N4BP3O15049 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.47■■■□□ 2.47
N4BP3O15049 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
N4BP3O15049 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.46■■■□□ 2.47
N4BP3O15049 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.44■■■□□ 2.46
N4BP3O15049 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.44■■■□□ 2.46
N4BP3O15049 AC136428.2-201ENST00000563187 214 ntBASIC30.44■■■□□ 2.46
N4BP3O15049 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.43■■■□□ 2.46
N4BP3O15049 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
N4BP3O15049 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.42■■■□□ 2.46
N4BP3O15049 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
N4BP3O15049 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms