Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMCO2A6NFE2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SMCO2A6NFE2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.97■■■□□ 2.71
SMCO2A6NFE2 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SMCO2A6NFE2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.95■■■□□ 2.71
SMCO2A6NFE2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.94■■■□□ 2.7
SMCO2A6NFE2 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
SMCO2A6NFE2 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.93■■■□□ 2.7
SMCO2A6NFE2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
SMCO2A6NFE2 RARRES2P7-201ENST00000567349 469 ntBASIC31.92■■■□□ 2.7
SMCO2A6NFE2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMCO2A6NFE2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SMCO2A6NFE2 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.89■■■□□ 2.7
SMCO2A6NFE2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.89■■■□□ 2.7
SMCO2A6NFE2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.88■■■□□ 2.69
SMCO2A6NFE2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMCO2A6NFE2 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC31.87■■■□□ 2.69
SMCO2A6NFE2 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SMCO2A6NFE2 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMCO2A6NFE2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SMCO2A6NFE2 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC31.85■■■□□ 2.69
SMCO2A6NFE2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC31.84■■■□□ 2.69
SMCO2A6NFE2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SMCO2A6NFE2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.83■■■□□ 2.69
SMCO2A6NFE2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.82■■■□□ 2.68
SMCO2A6NFE2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMCO2A6NFE2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC31.8■■■□□ 2.68
SMCO2A6NFE2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SMCO2A6NFE2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMCO2A6NFE2 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SMCO2A6NFE2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SMCO2A6NFE2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMCO2A6NFE2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMCO2A6NFE2 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SMCO2A6NFE2 SETD8P1-201ENST00000623146 1180 ntBASIC31.74■■■□□ 2.67
SMCO2A6NFE2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMCO2A6NFE2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.72■■■□□ 2.67
SMCO2A6NFE2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMCO2A6NFE2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SMCO2A6NFE2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SMCO2A6NFE2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.67■■■□□ 2.66
SMCO2A6NFE2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMCO2A6NFE2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMCO2A6NFE2 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SMCO2A6NFE2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMCO2A6NFE2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SMCO2A6NFE2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMCO2A6NFE2 AL133380.1-201ENST00000506013 324 ntBASIC31.62■■■□□ 2.65
SMCO2A6NFE2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
SMCO2A6NFE2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.61■■■□□ 2.65
SMCO2A6NFE2 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
SMCO2A6NFE2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.59■■■□□ 2.65
SMCO2A6NFE2 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC31.58■■■□□ 2.65
SMCO2A6NFE2 AC097358.2-201ENST00000607541 1159 ntBASIC31.58■■■□□ 2.65
SMCO2A6NFE2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
SMCO2A6NFE2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.57■■■□□ 2.64
SMCO2A6NFE2 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC31.56■■■□□ 2.64
SMCO2A6NFE2 AC136428.2-201ENST00000563187 214 ntBASIC31.56■■■□□ 2.64
SMCO2A6NFE2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SMCO2A6NFE2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SMCO2A6NFE2 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.52■■■□□ 2.64
SMCO2A6NFE2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.52■■■□□ 2.64
SMCO2A6NFE2 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMCO2A6NFE2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMCO2A6NFE2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.5■■■□□ 2.63
SMCO2A6NFE2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMCO2A6NFE2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMCO2A6NFE2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMCO2A6NFE2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMCO2A6NFE2 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMCO2A6NFE2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.47■■■□□ 2.63
SMCO2A6NFE2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.47■■■□□ 2.63
SMCO2A6NFE2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.43■■■□□ 2.62
SMCO2A6NFE2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
SMCO2A6NFE2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.42■■■□□ 2.62
SMCO2A6NFE2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.42■■■□□ 2.62
SMCO2A6NFE2 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SMCO2A6NFE2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
SMCO2A6NFE2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMCO2A6NFE2 AC120057.4-201ENST00000624722 1615 ntBASIC31.41■■■□□ 2.62
SMCO2A6NFE2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC31.39■■■□□ 2.62
SMCO2A6NFE2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
SMCO2A6NFE2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.37■■■□□ 2.61
SMCO2A6NFE2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.36■■■□□ 2.61
SMCO2A6NFE2 CAHM-201ENST00000604200 896 ntBASIC31.36■■■□□ 2.61
SMCO2A6NFE2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SMCO2A6NFE2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMCO2A6NFE2 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMCO2A6NFE2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMCO2A6NFE2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMCO2A6NFE2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SMCO2A6NFE2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMCO2A6NFE2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
SMCO2A6NFE2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.29■■■□□ 2.6
SMCO2A6NFE2 AL391121.1-201ENST00000607967 1349 ntBASIC31.29■■■□□ 2.6
SMCO2A6NFE2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
SMCO2A6NFE2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SMCO2A6NFE2 WASH5P-204ENST00000632292 975 ntBASIC31.27■■■□□ 2.6
SMCO2A6NFE2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMCO2A6NFE2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms