Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TRABD2BA6NFA1 ABHD17AP4-201ENST00000411545 909 ntBASIC27.16■■□□□ 1.94
TRABD2BA6NFA1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRABD2BA6NFA1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRABD2BA6NFA1 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.11■■□□□ 1.93
TRABD2BA6NFA1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
TRABD2BA6NFA1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
TRABD2BA6NFA1 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.09■■□□□ 1.93
TRABD2BA6NFA1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.07■■□□□ 1.92
TRABD2BA6NFA1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.07■■□□□ 1.92
TRABD2BA6NFA1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRABD2BA6NFA1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TRABD2BA6NFA1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.04■■□□□ 1.92
TRABD2BA6NFA1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.03■■□□□ 1.92
TRABD2BA6NFA1 AC145285.7-201ENST00000614819 1539 ntBASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 MIR3665-201ENST00000578708 105 ntBASIC27.02■■□□□ 1.92
TRABD2BA6NFA1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
TRABD2BA6NFA1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TRABD2BA6NFA1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 AL133380.1-201ENST00000506013 324 ntBASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.99■■□□□ 1.91
TRABD2BA6NFA1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.98■■□□□ 1.91
TRABD2BA6NFA1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TRABD2BA6NFA1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.97■■□□□ 1.91
TRABD2BA6NFA1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TRABD2BA6NFA1 HLA-V-202ENST00000446817 847 ntBASIC26.93■■□□□ 1.9
TRABD2BA6NFA1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.93■■□□□ 1.9
TRABD2BA6NFA1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.92■■□□□ 1.9
TRABD2BA6NFA1 AC087741.3-201ENST00000624270 1347 ntBASIC26.9■■□□□ 1.9
TRABD2BA6NFA1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.89■■□□□ 1.9
TRABD2BA6NFA1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
TRABD2BA6NFA1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TRABD2BA6NFA1 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRABD2BA6NFA1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.85■■□□□ 1.89
TRABD2BA6NFA1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
TRABD2BA6NFA1 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
TRABD2BA6NFA1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.83■■□□□ 1.89
TRABD2BA6NFA1 DUX4L28-201ENST00000623687 678 ntBASIC26.82■■□□□ 1.88
TRABD2BA6NFA1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.81■■□□□ 1.88
TRABD2BA6NFA1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TRABD2BA6NFA1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
TRABD2BA6NFA1 AC044849.2-201ENST00000606596 710 ntBASIC26.78■■□□□ 1.88
TRABD2BA6NFA1 CHML-205ENST00000638160 705 ntTSL 3 BASIC26.75■■□□□ 1.87
TRABD2BA6NFA1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.74■■□□□ 1.87
TRABD2BA6NFA1 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TRABD2BA6NFA1 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.73■■□□□ 1.87
TRABD2BA6NFA1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.72■■□□□ 1.87
TRABD2BA6NFA1 MIR762-201ENST00000390236 83 ntBASIC26.71■■□□□ 1.87
TRABD2BA6NFA1 AC005559.1-201ENST00000589661 871 ntBASIC26.68■■□□□ 1.86
TRABD2BA6NFA1 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC26.68■■□□□ 1.86
TRABD2BA6NFA1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TRABD2BA6NFA1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.66■■□□□ 1.86
TRABD2BA6NFA1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRABD2BA6NFA1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.64■■□□□ 1.86
TRABD2BA6NFA1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 ZNRF2P2-203ENST00000454624 420 ntBASIC26.63■■□□□ 1.85
TRABD2BA6NFA1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRABD2BA6NFA1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.61■■□□□ 1.85
TRABD2BA6NFA1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.6■■□□□ 1.85
TRABD2BA6NFA1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TRABD2BA6NFA1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.58■■□□□ 1.85
TRABD2BA6NFA1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TRABD2BA6NFA1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRABD2BA6NFA1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TRABD2BA6NFA1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.56■■□□□ 1.84
TRABD2BA6NFA1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
TRABD2BA6NFA1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TRABD2BA6NFA1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.52■■□□□ 1.84
TRABD2BA6NFA1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
TRABD2BA6NFA1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.49■■□□□ 1.83
TRABD2BA6NFA1 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TRABD2BA6NFA1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
TRABD2BA6NFA1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
TRABD2BA6NFA1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRABD2BA6NFA1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC26.44■■□□□ 1.82
TRABD2BA6NFA1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TRABD2BA6NFA1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
TRABD2BA6NFA1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms