Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV4S1A1TA0A5B7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV4S1A1TA0A5B7 RARRES2P7-201ENST00000567349 469 ntBASIC22.22■■□□□ 1.15
TCRBV4S1A1TA0A5B7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TCRBV4S1A1TA0A5B7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.21■■□□□ 1.15
TCRBV4S1A1TA0A5B7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.21■■□□□ 1.15
TCRBV4S1A1TA0A5B7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TCRBV4S1A1TA0A5B7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV4S1A1TA0A5B7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV4S1A1TA0A5B7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV4S1A1TA0A5B7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TCRBV4S1A1TA0A5B7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV4S1A1TA0A5B7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TCRBV4S1A1TA0A5B7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV4S1A1TA0A5B7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV4S1A1TA0A5B7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TCRBV4S1A1TA0A5B7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV4S1A1TA0A5B7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TCRBV4S1A1TA0A5B7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TCRBV4S1A1TA0A5B7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
TCRBV4S1A1TA0A5B7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TCRBV4S1A1TA0A5B7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
TCRBV4S1A1TA0A5B7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
TCRBV4S1A1TA0A5B7 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.11■■□□□ 1.13
TCRBV4S1A1TA0A5B7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
TCRBV4S1A1TA0A5B7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
TCRBV4S1A1TA0A5B7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.09■■□□□ 1.13
TCRBV4S1A1TA0A5B7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
TCRBV4S1A1TA0A5B7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.08■■□□□ 1.13
TCRBV4S1A1TA0A5B7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
TCRBV4S1A1TA0A5B7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TCRBV4S1A1TA0A5B7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.07■■□□□ 1.12
TCRBV4S1A1TA0A5B7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.07■■□□□ 1.12
TCRBV4S1A1TA0A5B7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TCRBV4S1A1TA0A5B7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV4S1A1TA0A5B7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22.05■■□□□ 1.12
TCRBV4S1A1TA0A5B7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV4S1A1TA0A5B7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV4S1A1TA0A5B7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV4S1A1TA0A5B7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV4S1A1TA0A5B7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV4S1A1TA0A5B7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TCRBV4S1A1TA0A5B7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC22.01■■□□□ 1.11
TCRBV4S1A1TA0A5B7 SETD8P1-201ENST00000623146 1180 ntBASIC22.01■■□□□ 1.11
TCRBV4S1A1TA0A5B7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.01■■□□□ 1.11
TCRBV4S1A1TA0A5B7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV4S1A1TA0A5B7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV4S1A1TA0A5B7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.99■■□□□ 1.11
TCRBV4S1A1TA0A5B7 AC097358.2-201ENST00000607541 1159 ntBASIC21.99■■□□□ 1.11
TCRBV4S1A1TA0A5B7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV4S1A1TA0A5B7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.98■■□□□ 1.11
TCRBV4S1A1TA0A5B7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.98■■□□□ 1.11
TCRBV4S1A1TA0A5B7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.97■■□□□ 1.11
TCRBV4S1A1TA0A5B7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.97■■□□□ 1.11
TCRBV4S1A1TA0A5B7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC21.97■■□□□ 1.11
TCRBV4S1A1TA0A5B7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TCRBV4S1A1TA0A5B7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV4S1A1TA0A5B7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC21.95■■□□□ 1.1
TCRBV4S1A1TA0A5B7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV4S1A1TA0A5B7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
TCRBV4S1A1TA0A5B7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TCRBV4S1A1TA0A5B7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TCRBV4S1A1TA0A5B7 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC21.93■■□□□ 1.1
TCRBV4S1A1TA0A5B7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
TCRBV4S1A1TA0A5B7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TCRBV4S1A1TA0A5B7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.89■■□□□ 1.09
TCRBV4S1A1TA0A5B7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TCRBV4S1A1TA0A5B7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.89■■□□□ 1.09
TCRBV4S1A1TA0A5B7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TCRBV4S1A1TA0A5B7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TCRBV4S1A1TA0A5B7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.88■■□□□ 1.09
TCRBV4S1A1TA0A5B7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TCRBV4S1A1TA0A5B7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TCRBV4S1A1TA0A5B7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TCRBV4S1A1TA0A5B7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
TCRBV4S1A1TA0A5B7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBV4S1A1TA0A5B7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.85■■□□□ 1.09
TCRBV4S1A1TA0A5B7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TCRBV4S1A1TA0A5B7 AC136428.2-201ENST00000563187 214 ntBASIC21.85■■□□□ 1.09
TCRBV4S1A1TA0A5B7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV4S1A1TA0A5B7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TCRBV4S1A1TA0A5B7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV4S1A1TA0A5B7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TCRBV4S1A1TA0A5B7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TCRBV4S1A1TA0A5B7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.82■■□□□ 1.08
TCRBV4S1A1TA0A5B7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TCRBV4S1A1TA0A5B7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC21.8■■□□□ 1.08
TCRBV4S1A1TA0A5B7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TCRBV4S1A1TA0A5B7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV4S1A1TA0A5B7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.77■■□□□ 1.08
TCRBV4S1A1TA0A5B7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TCRBV4S1A1TA0A5B7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.76■■□□□ 1.07
TCRBV4S1A1TA0A5B7 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.76■■□□□ 1.07
TCRBV4S1A1TA0A5B7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV4S1A1TA0A5B7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV4S1A1TA0A5B7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TCRBV4S1A1TA0A5B7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC21.75■■□□□ 1.07
TCRBV4S1A1TA0A5B7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
TCRBV4S1A1TA0A5B7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TCRBV4S1A1TA0A5B7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms