Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV8-2A0A0B4J237 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV8-2A0A0B4J237 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV8-2A0A0B4J237 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV8-2A0A0B4J237 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV8-2A0A0B4J237 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAV8-2A0A0B4J237 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAV8-2A0A0B4J237 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV8-2A0A0B4J237 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV8-2A0A0B4J237 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21■□□□□ 0.95
TRAV8-2A0A0B4J237 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV8-2A0A0B4J237 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TRAV8-2A0A0B4J237 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV8-2A0A0B4J237 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAV8-2A0A0B4J237 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAV8-2A0A0B4J237 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
TRAV8-2A0A0B4J237 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC20.97■□□□□ 0.95
TRAV8-2A0A0B4J237 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAV8-2A0A0B4J237 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
TRAV8-2A0A0B4J237 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRAV8-2A0A0B4J237 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
TRAV8-2A0A0B4J237 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV8-2A0A0B4J237 MVK-208ENST00000539696 608 ntTSL 5 BASIC20.92■□□□□ 0.94
TRAV8-2A0A0B4J237 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-2A0A0B4J237 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV8-2A0A0B4J237 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRAV8-2A0A0B4J237 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC20.91■□□□□ 0.94
TRAV8-2A0A0B4J237 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-2A0A0B4J237 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.9■□□□□ 0.94
TRAV8-2A0A0B4J237 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRAV8-2A0A0B4J237 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.9■□□□□ 0.94
TRAV8-2A0A0B4J237 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRAV8-2A0A0B4J237 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRAV8-2A0A0B4J237 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV8-2A0A0B4J237 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC20.87■□□□□ 0.93
TRAV8-2A0A0B4J237 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRAV8-2A0A0B4J237 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV8-2A0A0B4J237 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRAV8-2A0A0B4J237 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV8-2A0A0B4J237 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRAV8-2A0A0B4J237 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.85■□□□□ 0.93
TRAV8-2A0A0B4J237 AC120057.4-201ENST00000624722 1615 ntBASIC20.85■□□□□ 0.93
TRAV8-2A0A0B4J237 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV8-2A0A0B4J237 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRAV8-2A0A0B4J237 DYNLL1-208ENST00000550178 581 ntBASIC20.84■□□□□ 0.93
TRAV8-2A0A0B4J237 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRAV8-2A0A0B4J237 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.82■□□□□ 0.92
TRAV8-2A0A0B4J237 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRAV8-2A0A0B4J237 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRAV8-2A0A0B4J237 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.79■□□□□ 0.92
TRAV8-2A0A0B4J237 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRAV8-2A0A0B4J237 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRAV8-2A0A0B4J237 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRAV8-2A0A0B4J237 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRAV8-2A0A0B4J237 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV8-2A0A0B4J237 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV8-2A0A0B4J237 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRAV8-2A0A0B4J237 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV8-2A0A0B4J237 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC20.76■□□□□ 0.91
TRAV8-2A0A0B4J237 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRAV8-2A0A0B4J237 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV8-2A0A0B4J237 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV8-2A0A0B4J237 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
TRAV8-2A0A0B4J237 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRAV8-2A0A0B4J237 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.75■□□□□ 0.91
TRAV8-2A0A0B4J237 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV8-2A0A0B4J237 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRAV8-2A0A0B4J237 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.73■□□□□ 0.91
TRAV8-2A0A0B4J237 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.73■□□□□ 0.91
TRAV8-2A0A0B4J237 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAV8-2A0A0B4J237 AL031258.1-201ENST00000623562 325 ntBASIC20.72■□□□□ 0.91
TRAV8-2A0A0B4J237 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAV8-2A0A0B4J237 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.71■□□□□ 0.91
TRAV8-2A0A0B4J237 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV8-2A0A0B4J237 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAV8-2A0A0B4J237 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV8-2A0A0B4J237 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAV8-2A0A0B4J237 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV8-2A0A0B4J237 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV8-2A0A0B4J237 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV8-2A0A0B4J237 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
TRAV8-2A0A0B4J237 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRAV8-2A0A0B4J237 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRAV8-2A0A0B4J237 AP002365.1-201ENST00000603448 772 ntBASIC20.65■□□□□ 0.9
TRAV8-2A0A0B4J237 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV8-2A0A0B4J237 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV8-2A0A0B4J237 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRAV8-2A0A0B4J237 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV8-2A0A0B4J237 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV8-2A0A0B4J237 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV8-2A0A0B4J237 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV8-2A0A0B4J237 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV8-2A0A0B4J237 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV8-2A0A0B4J237 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV8-2A0A0B4J237 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV8-2A0A0B4J237 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-2A0A0B4J237 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-2A0A0B4J237 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV8-2A0A0B4J237 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV8-2A0A0B4J237 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms