Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 HINT1-205ENST00000508488 703 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.82□□□□□ -0.52
COL8A2P25067 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC11.82□□□□□ -0.52
COL8A2P25067 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.82□□□□□ -0.52
COL8A2P25067 RN7SL357P-201ENST00000581065 298 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 AP005264.5-201ENST00000590066 467 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 DBP-202ENST00000593500 712 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC140113.1-201ENST00000603467 169 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 HPX-213ENST00000615166 826 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 PDXDC2P-206ENST00000534700 1315 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 AC004554.1-201ENST00000422830 1468 ntBASIC11.82□□□□□ -0.52
COL8A2P25067 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 USP39-207ENST00000450066 2086 ntTSL 2 BASIC11.82□□□□□ -0.52
COL8A2P25067 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
COL8A2P25067 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC11.82□□□□□ -0.52
COL8A2P25067 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 MSANTD2P1-201ENST00000445341 1368 ntBASIC11.81□□□□□ -0.52
COL8A2P25067 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
COL8A2P25067 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC11.81□□□□□ -0.52
COL8A2P25067 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 KRT8P2-201ENST00000556193 944 ntBASIC11.81□□□□□ -0.52
COL8A2P25067 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
COL8A2P25067 AC091769.1-201ENST00000619576 568 ntBASIC11.81□□□□□ -0.52
COL8A2P25067 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC11.81□□□□□ -0.52
COL8A2P25067 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
COL8A2P25067 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 AC016397.2-201ENST00000624848 1985 ntBASIC11.81□□□□□ -0.52
COL8A2P25067 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.81□□□□□ -0.52
COL8A2P25067 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
COL8A2P25067 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
COL8A2P25067 AC019109.1-201ENST00000401725 1874 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 SBF1P1-201ENST00000444527 5631 ntBASIC11.8□□□□□ -0.52
COL8A2P25067 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
COL8A2P25067 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms