Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.29□□□□□ -0.28
CCNA2P20248 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.29□□□□□ -0.28
CCNA2P20248 YBX1P6-201ENST00000442962 1002 ntBASIC13.29□□□□□ -0.28
CCNA2P20248 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.29□□□□□ -0.28
CCNA2P20248 ALG3P1-201ENST00000508806 1114 ntBASIC13.29□□□□□ -0.28
CCNA2P20248 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.29□□□□□ -0.28
CCNA2P20248 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.29□□□□□ -0.28
CCNA2P20248 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 MARK2P9-201ENST00000430958 1727 ntBASIC13.29□□□□□ -0.28
CCNA2P20248 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.29□□□□□ -0.28
CCNA2P20248 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCNA2P20248 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CCNA2P20248 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.29□□□□□ -0.28
CCNA2P20248 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 AL590440.2-201ENST00000641973 1595 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 AC119751.2-201ENST00000504529 210 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.28□□□□□ -0.28
CCNA2P20248 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CCNA2P20248 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 SORD2P-201ENST00000558556 1069 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 AP005482.1-201ENST00000563722 1273 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 AC010328.2-201ENST00000597698 1111 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 MIR6805-201ENST00000615055 62 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 AC009542.2-202ENST00000619004 1067 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 COX11-210ENST00000639671 696 ntBASIC13.28□□□□□ -0.28
CCNA2P20248 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CCNA2P20248 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.28□□□□□ -0.28
CCNA2P20248 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCNA2P20248 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.27□□□□□ -0.28
CCNA2P20248 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CCNA2P20248 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.27□□□□□ -0.28
CCNA2P20248 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCNA2P20248 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCNA2P20248 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CCNA2P20248 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.27□□□□□ -0.28
CCNA2P20248 AGGF1P10-201ENST00000635005 2191 ntBASIC13.27□□□□□ -0.28
CCNA2P20248 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCNA2P20248 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.27□□□□□ -0.28
CCNA2P20248 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CCNA2P20248 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCNA2P20248 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.27□□□□□ -0.28
CCNA2P20248 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms