Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC108024.1-201ENST00000626286 1721 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC098850.1-201ENST00000419919 790 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 TMPRSS11CP-201ENST00000453277 683 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC093433.1-201ENST00000458048 571 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AC009486.1-201ENST00000569860 813 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AL691403.2-201ENST00000618460 490 ntBASIC12.15□□□□□ -0.46
BEST4Q8NFU0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
BEST4Q8NFU0 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.15□□□□□ -0.47
BEST4Q8NFU0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC002350.2-201ENST00000623894 1828 ntBASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC011481.3-201ENST00000623895 5594 ntBASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 BASP1P1-201ENST00000430708 665 ntBASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AL162726.2-201ENST00000438986 1017 ntBASIC12.14□□□□□ -0.47
BEST4Q8NFU0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC011495.1-201ENST00000498085 584 ntBASIC12.14□□□□□ -0.47
BEST4Q8NFU0 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
BEST4Q8NFU0 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms