Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 MRPL37P1-201ENST00000592451 1337 ntBASIC13.1□□□□□ -0.31
PER3P56645 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.1□□□□□ -0.31
PER3P56645 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PER3P56645 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PER3P56645 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.09□□□□□ -0.31
PER3P56645 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 AC020658.7-201ENST00000624274 2442 ntBASIC13.09□□□□□ -0.31
PER3P56645 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 KLF2P1-201ENST00000447438 1042 ntBASIC13.09□□□□□ -0.31
PER3P56645 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 DUTP3-201ENST00000450025 415 ntBASIC13.09□□□□□ -0.31
PER3P56645 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.09□□□□□ -0.31
PER3P56645 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.09□□□□□ -0.31
PER3P56645 PPOX-204ENST00000462866 473 ntTSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.09□□□□□ -0.31
PER3P56645 AREG-202ENST00000502307 956 ntTSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 PHBP15-201ENST00000574228 665 ntBASIC13.09□□□□□ -0.31
PER3P56645 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.09□□□□□ -0.31
PER3P56645 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 FO393412.1-201ENST00000619841 382 ntBASIC13.09□□□□□ -0.31
PER3P56645 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
PER3P56645 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PER3P56645 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.09□□□□□ -0.31
PER3P56645 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PER3P56645 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PER3P56645 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PER3P56645 AC114271.1-201ENST00000612689 2813 ntBASIC13.08□□□□□ -0.31
PER3P56645 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
PER3P56645 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PER3P56645 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
PER3P56645 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PER3P56645 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 AC004241.5-201ENST00000623870 2448 ntBASIC13.08□□□□□ -0.32
PER3P56645 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PER3P56645 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
PER3P56645 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms