Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC144522.1-201ENST00000625111 1658 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CFTRP3-201ENST00000376400 212 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AL645933.1-201ENST00000440087 609 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 NEU3-202ENST00000526068 431 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AL160314.3-201ENST00000556041 767 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 RN7SL774P-201ENST00000577467 290 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 BX640514.1-201ENST00000583223 1918 ntBASIC12.81□□□□□ -0.36
USB1Q9BQ65 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
USB1Q9BQ65 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
USB1Q9BQ65 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC005154.1-201ENST00000434399 1217 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 MAGEA5-201ENST00000446757 942 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
USB1Q9BQ65 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.8□□□□□ -0.36
USB1Q9BQ65 HIST2H2BC-201ENST00000498492 580 ntBASIC12.8□□□□□ -0.36
USB1Q9BQ65 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms