RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 AEBP2Q6ZN18 517 aaPredicted RBP32.43■■■□□ 2.78
CFTRP3-201ENST00000376400 CHIC1Q5VXU3 224 aa31.51■■■□□ 2.63
CFTRP3-201ENST00000376400 PHF23Q9BUL5 403 aaPredicted RBP27.67■■■□□ 2.02
CFTRP3-201ENST00000376400 SENP3Q9H4L4 574 aaPredicted RBP27.61■■■□□ 2.01
CFTRP3-201ENST00000376400 FOXD1Q16676 465 aa25.62■■□□□ 1.69
CFTRP3-201ENST00000376400 PLPPR3Q6T4P5 718 aa25.54■■□□□ 1.68
CFTRP3-201ENST00000376400 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
CFTRP3-201ENST00000376400 PPP6R1Q9UPN7 881 aa24.48■■□□□ 1.51
CFTRP3-201ENST00000376400 ADRA2BP18089 450 aa24.47■■□□□ 1.51
CFTRP3-201ENST00000376400 PIAS4Q8N2W9 510 aaPredicted RBP24.14■■□□□ 1.45
CFTRP3-201ENST00000376400 MSH5O43196 834 aa23.75■■□□□ 1.39
CFTRP3-201ENST00000376400 PPP4R3CPQ6ZMV5 832 aa22.46■■□□□ 1.19
CFTRP3-201ENST00000376400 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
CFTRP3-201ENST00000376400 MAPK8IP2Q13387 824 aaPredicted RBP22.26■■□□□ 1.15
CFTRP3-201ENST00000376400 CCDC180Q9P1Z9 1646 aa22.06■■□□□ 1.12
CFTRP3-201ENST00000376400 ABCC9O60706 1549 aa22■■□□□ 1.11
CFTRP3-201ENST00000376400 DMRT2Q9Y5R5 561 aa21.98■■□□□ 1.11
CFTRP3-201ENST00000376400 POTEDQ86YR6 584 aa21.95■■□□□ 1.1
CFTRP3-201ENST00000376400 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
CFTRP3-201ENST00000376400 NCBP3Q53F19 620 aaKnown RBP21.85■■□□□ 1.09
CFTRP3-201ENST00000376400 KCNA4P22459 653 aa21.68■■□□□ 1.06
CFTRP3-201ENST00000376400 RNF216Q9NWF9 866 aaPredicted RBP21.51■■□□□ 1.03
CFTRP3-201ENST00000376400 NPM3O75607 178 aaKnown RBP21.47■■□□□ 1.03
CFTRP3-201ENST00000376400 HOXD11P31277 338 aaPredicted RBP21.45■■□□□ 1.02
CFTRP3-201ENST00000376400 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
CFTRP3-201ENST00000376400 RB1CC1Q8TDY2 1594 aa20.95■□□□□ 0.94
CFTRP3-201ENST00000376400 DNAJC5BQ9UF47 199 aa20.86■□□□□ 0.93
CFTRP3-201ENST00000376400 NACADO15069 1562 aa20.81■□□□□ 0.92
CFTRP3-201ENST00000376400 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
CFTRP3-201ENST00000376400 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
CFTRP3-201ENST00000376400 DCAF8L2P0C7V8 631 aa20.55■□□□□ 0.88
CFTRP3-201ENST00000376400 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
CFTRP3-201ENST00000376400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
CFTRP3-201ENST00000376400 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
CFTRP3-201ENST00000376400 BICRAQ9NZM4 1560 aa20.4■□□□□ 0.86
CFTRP3-201ENST00000376400 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
CFTRP3-201ENST00000376400 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
CFTRP3-201ENST00000376400 RNF39Q9H2S5 420 aa20.3■□□□□ 0.84
CFTRP3-201ENST00000376400 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
CFTRP3-201ENST00000376400 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
CFTRP3-201ENST00000376400 SHROOM4Q9ULL8 1493 aa20.08■□□□□ 0.81
CFTRP3-201ENST00000376400 C1QBPQ07021 282 aaKnown RBP20.08■□□□□ 0.81
CFTRP3-201ENST00000376400 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
CFTRP3-201ENST00000376400 FOXD4L1Q9NU39 408 aa20.04■□□□□ 0.8
CFTRP3-201ENST00000376400 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
CFTRP3-201ENST00000376400 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
CFTRP3-201ENST00000376400 ZBTB22O15209 634 aa19.91■□□□□ 0.78
CFTRP3-201ENST00000376400 MYCNP04198 464 aaPredicted RBP19.87■□□□□ 0.77
CFTRP3-201ENST00000376400 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
CFTRP3-201ENST00000376400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.84■□□□□ 0.77
CFTRP3-201ENST00000376400 HNRNPUL2Q1KMD3 747 aaKnown RBP19.84■□□□□ 0.77
CFTRP3-201ENST00000376400 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
CFTRP3-201ENST00000376400 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
CFTRP3-201ENST00000376400 SAMD1Q6SPF0 538 aaPredicted RBP19.73■□□□□ 0.75
CFTRP3-201ENST00000376400 APLP2Q06481 763 aa19.69■□□□□ 0.74
CFTRP3-201ENST00000376400 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
CFTRP3-201ENST00000376400 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
CFTRP3-201ENST00000376400 CAPN15O75808 1086 aa19.57■□□□□ 0.72
CFTRP3-201ENST00000376400 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
CFTRP3-201ENST00000376400 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
CFTRP3-201ENST00000376400 ATXN8OSP0DMR3 200 aa19.36■□□□□ 0.69
CFTRP3-201ENST00000376400 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
CFTRP3-201ENST00000376400 DSG3P32926 999 aa19.25■□□□□ 0.67
CFTRP3-201ENST00000376400 NCAPD3P42695 1498 aa19.21■□□□□ 0.67
CFTRP3-201ENST00000376400 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
CFTRP3-201ENST00000376400 ABCB7O75027 752 aa19.14■□□□□ 0.65
CFTRP3-201ENST00000376400 ATAD2BQ9ULI0 1458 aa19.14■□□□□ 0.65
CFTRP3-201ENST00000376400 SMARCA2P51531 1590 aa19.09■□□□□ 0.65
CFTRP3-201ENST00000376400 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
CFTRP3-201ENST00000376400 POLA2Q14181 598 aa19.05■□□□□ 0.64
CFTRP3-201ENST00000376400 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
CFTRP3-201ENST00000376400 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
CFTRP3-201ENST00000376400 CUX2O14529 1486 aa18.97■□□□□ 0.63
CFTRP3-201ENST00000376400 DNAJC5Q9H3Z4 198 aa18.96■□□□□ 0.63
CFTRP3-201ENST00000376400 ERCC6Q03468 1493 aa18.96■□□□□ 0.63
CFTRP3-201ENST00000376400 BAZ1BQ9UIG0 1483 aaKnown RBP18.93■□□□□ 0.62
CFTRP3-201ENST00000376400 NESP48681 1621 aa18.92■□□□□ 0.62
CFTRP3-201ENST00000376400 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.62
CFTRP3-201ENST00000376400 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
CFTRP3-201ENST00000376400 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
CFTRP3-201ENST00000376400 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
CFTRP3-201ENST00000376400 KIF21AQ7Z4S6 1674 aa18.73■□□□□ 0.59
CFTRP3-201ENST00000376400 WIZO95785 1651 aa18.69■□□□□ 0.58
CFTRP3-201ENST00000376400 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
CFTRP3-201ENST00000376400 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
CFTRP3-201ENST00000376400 FBLN2P98095 1184 aa18.59■□□□□ 0.57
CFTRP3-201ENST00000376400 MRC2Q9UBG0 1479 aa18.5■□□□□ 0.55
CFTRP3-201ENST00000376400 WDR62O43379 1518 aa18.49■□□□□ 0.55
CFTRP3-201ENST00000376400 RSF1Q96T23 1441 aaPredicted RBP18.48■□□□□ 0.55
CFTRP3-201ENST00000376400 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
CFTRP3-201ENST00000376400 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
CFTRP3-201ENST00000376400 CEP164Q9UPV0 1460 aa18.41■□□□□ 0.54
CFTRP3-201ENST00000376400 CFTRP13569 1480 aa18.4■□□□□ 0.54
CFTRP3-201ENST00000376400 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
CFTRP3-201ENST00000376400 OSCARQ8IYS5 282 aa18.39■□□□□ 0.53
CFTRP3-201ENST00000376400 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
CFTRP3-201ENST00000376400 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
CFTRP3-201ENST00000376400 URB2Q14146 1524 aaKnown RBP18.27■□□□□ 0.51
CFTRP3-201ENST00000376400 SPDYE2BA6NHP3 402 aa18.2■□□□□ 0.5
CFTRP3-201ENST00000376400 SPDYE6P0CI01 402 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms