Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 MKRN5P-201ENST00000445263 1467 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 EEF1DP6-201ENST00000449232 372 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 RNA5SP423-201ENST00000517127 109 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC007718.1-201ENST00000621078 280 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 MSNP1-201ENST00000511640 1732 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 MARK2P16-201ENST00000605714 1723 ntBASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC16.38■□□□□ 0.21
SMARCC2Q8TAQ2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AL583805.1-201ENST00000391389 531 ntBASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AP000358.1-201ENST00000456260 156 ntBASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AC079328.1-201ENST00000560358 952 ntBASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 NUTM2HP-201ENST00000442076 2498 ntBASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMARCC2Q8TAQ2 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms