Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHL1O00533 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 GUCY2EP-203ENST00000531117 1918 ntBASIC17.72■□□□□ 0.43
CHL1O00533 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CHL1O00533 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.72■□□□□ 0.43
CHL1O00533 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.72■□□□□ 0.43
CHL1O00533 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.72■□□□□ 0.43
CHL1O00533 GCSHP3-201ENST00000431120 391 ntBASIC17.72■□□□□ 0.43
CHL1O00533 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 BAK1P2-201ENST00000532665 631 ntBASIC17.72■□□□□ 0.43
CHL1O00533 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CHL1O00533 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC17.72■□□□□ 0.43
CHL1O00533 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CHL1O00533 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 AL358781.1-202ENST00000321081 1360 ntBASIC17.71■□□□□ 0.43
CHL1O00533 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 DDC-214ENST00000622873 1839 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 U3.5-201ENST00000363448 216 ntBASIC17.71■□□□□ 0.43
CHL1O00533 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 RPL13AP19-201ENST00000434320 584 ntBASIC17.71■□□□□ 0.43
CHL1O00533 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 NALT1-202ENST00000450304 437 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 AL135901.1-201ENST00000451812 333 ntBASIC17.71■□□□□ 0.43
CHL1O00533 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CHL1O00533 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.71■□□□□ 0.43
CHL1O00533 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC17.71■□□□□ 0.43
CHL1O00533 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.71■□□□□ 0.43
CHL1O00533 MIR4472-1-201ENST00000584349 80 ntBASIC17.71■□□□□ 0.43
CHL1O00533 AC010976.2-201ENST00000609697 852 ntBASIC17.71■□□□□ 0.43
CHL1O00533 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC17.71■□□□□ 0.43
CHL1O00533 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CHL1O00533 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CHL1O00533 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CHL1O00533 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CHL1O00533 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHL1O00533 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHL1O00533 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHL1O00533 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CHL1O00533 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHL1O00533 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC17.7■□□□□ 0.42
CHL1O00533 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHL1O00533 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms