Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AL512310.5-201ENST00000551999 515 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC013355.1-201ENST00000562625 723 ntBASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
HLA-DRB4X5D2U9 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 FAM90A12P-201ENST00000519497 2375 ntBASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 FAM90A24P-201ENST00000520792 2369 ntBASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 POM121L14P-201ENST00000406100 1558 ntBASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
HLA-DRB4X5D2U9 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 GRN-222ENST00000639447 1314 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 DPM3-202ENST00000368399 517 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 KRT18P15-201ENST00000458108 1291 ntBASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
HLA-DRB4X5D2U9 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms