Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 MRS2-203ENST00000378386 3313 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 PTCH1-203ENST00000375274 4720 ntTSL 5 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 SERINC4-202ENST00000319327 2630 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 LINC01166-201ENST00000443633 2619 ntTSL 2 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 HMOX2-203ENST00000406590 1727 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 AL353616.1-201ENST00000436315 2860 ntBASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 MANEA-AS1-201ENST00000564541 2268 ntBASIC7.1□□□□□ -1.27
LINC01558Q9Y6Z2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 LINC00052-201ENST00000560153 1966 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 KIF26B-201ENST00000366518 12113 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 CYP2B6-201ENST00000324071 3054 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MAN2C1-224ENST00000565683 3300 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SLC8A3-201ENST00000216568 2916 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PCAT29-201ENST00000558411 2121 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SERPINE1-201ENST00000223095 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RUNX1T1-202ENST00000360348 2370 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 LAMA4-201ENST00000230538 6547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AP1B1-205ENST00000415447 2838 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PRKCQ-202ENST00000397176 3096 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 HMGA1P7-201ENST00000406908 502 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC092647.4-201ENST00000457211 535 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 SERBP1P5-201ENST00000510079 1181 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 PENK-208ENST00000523051 772 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AP003097.1-201ENST00000530657 1135 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC080038.1-201ENST00000611274 1154 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AL592071.1-201ENST00000611956 408 ntBASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 IKBKB-230ENST00000629753 4069 ntTSL 2 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 LHX4-201ENST00000263726 5820 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MORC2-AS1-201ENST00000422995 2274 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
LINC01558Q9Y6Z2 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms