RNA–Protein interactions for RNA: ENST00000443633.1

LINC01166-201, Transcript of long intergenic non-protein coding RNA 1166, humanhuman

TSL 2 BASIC

Gene LINC01166, Length 2,619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01166-201ENST00000443633 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
LINC01166-201ENST00000443633 CCDC180Q9P1Z9 1646 aa21.33■■□□□ 1.01
LINC01166-201ENST00000443633 DCAF8L2P0C7V8 631 aa20.91■□□□□ 0.94
LINC01166-201ENST00000443633 ZCCHC6Q5VYS8 1495 aaKnown RBP20.86■□□□□ 0.93
LINC01166-201ENST00000443633 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
LINC01166-201ENST00000443633 ABCC9O60706 1549 aa20.37■□□□□ 0.85
LINC01166-201ENST00000443633 DCAF1Q9Y4B6 1507 aa20.34■□□□□ 0.85
LINC01166-201ENST00000443633 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
LINC01166-201ENST00000443633 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
LINC01166-201ENST00000443633 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
LINC01166-201ENST00000443633 NACADO15069 1562 aa19.9■□□□□ 0.78
LINC01166-201ENST00000443633 RB1CC1Q8TDY2 1594 aa19.71■□□□□ 0.75
LINC01166-201ENST00000443633 HRCP23327 699 aa19.6■□□□□ 0.73
LINC01166-201ENST00000443633 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
LINC01166-201ENST00000443633 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
LINC01166-201ENST00000443633 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
LINC01166-201ENST00000443633 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
LINC01166-201ENST00000443633 MROH2BQ7Z745 1585 aa19.29■□□□□ 0.68
LINC01166-201ENST00000443633 PPARGC1BQ86YN6 1023 aaKnown RBP19.29■□□□□ 0.68
LINC01166-201ENST00000443633 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
LINC01166-201ENST00000443633 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
LINC01166-201ENST00000443633 BICRAQ9NZM4 1560 aa19.19■□□□□ 0.66
LINC01166-201ENST00000443633 WIZO95785 1651 aa19.15■□□□□ 0.66
LINC01166-201ENST00000443633 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
LINC01166-201ENST00000443633 SMARCA4P51532 1647 aa19.02■□□□□ 0.63
LINC01166-201ENST00000443633 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
LINC01166-201ENST00000443633 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
LINC01166-201ENST00000443633 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
LINC01166-201ENST00000443633 LOC105371045A0A1W2PR82 267 aa18.74■□□□□ 0.59
LINC01166-201ENST00000443633 PELP1Q8IZL8 1130 aaKnown RBP18.71■□□□□ 0.59
LINC01166-201ENST00000443633 ATAD2BQ9ULI0 1458 aa18.7■□□□□ 0.58
LINC01166-201ENST00000443633 SMARCA2P51531 1590 aa18.7■□□□□ 0.58
LINC01166-201ENST00000443633 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
LINC01166-201ENST00000443633 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
LINC01166-201ENST00000443633 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
LINC01166-201ENST00000443633 EIF4G1Q04637 1599 aaKnown RBP18.6■□□□□ 0.57
LINC01166-201ENST00000443633 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
LINC01166-201ENST00000443633 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
LINC01166-201ENST00000443633 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
LINC01166-201ENST00000443633 ABCC8Q09428 1581 aa18.52■□□□□ 0.56
LINC01166-201ENST00000443633 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
LINC01166-201ENST00000443633 ZEB1P37275 1124 aaPredicted RBP18.35■□□□□ 0.53
LINC01166-201ENST00000443633 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
LINC01166-201ENST00000443633 CC2D2AQ9P2K1 1620 aa18.3■□□□□ 0.52
LINC01166-201ENST00000443633 WRNQ14191 1432 aaPredicted RBP eCLIP18.28■□□□□ 0.52
LINC01166-201ENST00000443633 SOGA1O94964 1423 aa18.25■□□□□ 0.51
LINC01166-201ENST00000443633 RUSC2Q8N2Y8 1516 aa18.2■□□□□ 0.5
LINC01166-201ENST00000443633 SYNJ1O43426 1573 aa18.19■□□□□ 0.5
LINC01166-201ENST00000443633 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
LINC01166-201ENST00000443633 CFTRP13569 1480 aa18.13■□□□□ 0.49
LINC01166-201ENST00000443633 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
LINC01166-201ENST00000443633 CADPSQ9ULU8 1353 aa18.07■□□□□ 0.48
LINC01166-201ENST00000443633 ACIN1Q9UKV3 1341 aaKnown RBP18.07■□□□□ 0.48
LINC01166-201ENST00000443633 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
LINC01166-201ENST00000443633 UBTFP17480 764 aaKnown RBP18.02■□□□□ 0.48
LINC01166-201ENST00000443633 TOP2BQ02880 1626 aa18■□□□□ 0.47
LINC01166-201ENST00000443633 CUX1P39880 1505 aa17.99■□□□□ 0.47
LINC01166-201ENST00000443633 EEA1Q15075 1411 aa17.99■□□□□ 0.47
LINC01166-201ENST00000443633 NESP48681 1621 aa17.97■□□□□ 0.47
LINC01166-201ENST00000443633 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
LINC01166-201ENST00000443633 BIVM-ERCC5R4GMW8 1640 aa17.93■□□□□ 0.46
LINC01166-201ENST00000443633 MYT1Q01538 1121 aa17.91■□□□□ 0.46
LINC01166-201ENST00000443633 FANCD2Q9BXW9 1451 aa17.88■□□□□ 0.45
LINC01166-201ENST00000443633 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
LINC01166-201ENST00000443633 RANGAP1P46060 587 aaPredicted RBP17.87■□□□□ 0.45
LINC01166-201ENST00000443633 PRDM2Q13029 1718 aa17.87■□□□□ 0.45
LINC01166-201ENST00000443633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
LINC01166-201ENST00000443633 CEP162Q5TB80 1403 aa17.86■□□□□ 0.45
LINC01166-201ENST00000443633 GOLGA3Q08378 1498 aa17.86■□□□□ 0.45
LINC01166-201ENST00000443633 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
LINC01166-201ENST00000443633 RAPGEF2Q9Y4G8 1499 aa17.82■□□□□ 0.44
LINC01166-201ENST00000443633 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
LINC01166-201ENST00000443633 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
LINC01166-201ENST00000443633 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
LINC01166-201ENST00000443633 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
LINC01166-201ENST00000443633 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
LINC01166-201ENST00000443633 FGD5Q6ZNL6 1462 aa17.77■□□□□ 0.43
LINC01166-201ENST00000443633 KIF21BO75037 1637 aa17.76■□□□□ 0.43
LINC01166-201ENST00000443633 CUX2O14529 1486 aa17.74■□□□□ 0.43
LINC01166-201ENST00000443633 LAMC3Q9Y6N6 1575 aa17.72■□□□□ 0.43
LINC01166-201ENST00000443633 RAD54L2Q9Y4B4 1467 aa17.7■□□□□ 0.42
LINC01166-201ENST00000443633 PRXQ9BXM0 1461 aa17.69■□□□□ 0.42
LINC01166-201ENST00000443633 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
LINC01166-201ENST00000443633 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
LINC01166-201ENST00000443633 IGF1RP08069 1367 aa17.66■□□□□ 0.42
LINC01166-201ENST00000443633 CLIP1P30622 1438 aa17.66■□□□□ 0.42
LINC01166-201ENST00000443633 DNMBPQ6XZF7 1577 aa17.65■□□□□ 0.42
LINC01166-201ENST00000443633 URB2Q14146 1524 aaKnown RBP17.65■□□□□ 0.42
LINC01166-201ENST00000443633 POLA1P09884 1462 aaPredicted RBP17.64■□□□□ 0.41
LINC01166-201ENST00000443633 KIF21AQ7Z4S6 1674 aa17.6■□□□□ 0.41
LINC01166-201ENST00000443633 ERICH3Q5RHP9 1530 aa17.58■□□□□ 0.4
LINC01166-201ENST00000443633 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.4
LINC01166-201ENST00000443633 TDRD9Q8NDG6 1382 aaKnown RBP17.55■□□□□ 0.4
LINC01166-201ENST00000443633 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
LINC01166-201ENST00000443633 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
LINC01166-201ENST00000443633 VPS8Q8N3P4 1428 aa17.48■□□□□ 0.39
LINC01166-201ENST00000443633 APLP2Q06481 763 aa17.46■□□□□ 0.39
LINC01166-201ENST00000443633 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
LINC01166-201ENST00000443633 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
LINC01166-201ENST00000443633 P3H3Q8IVL6 736 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms