RNA–Protein interactions for RNA: ENST00000263726.3

LHX4-201, Transcript of LIM homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX4, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-201ENST00000263726 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
LHX4-201ENST00000263726 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
LHX4-201ENST00000263726 SHROOM4Q9ULL8 1493 aa18.06■□□□□ 0.48
LHX4-201ENST00000263726 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
LHX4-201ENST00000263726 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LHX4-201ENST00000263726 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
LHX4-201ENST00000263726 HRCP23327 699 aa17.78■□□□□ 0.44
LHX4-201ENST00000263726 MYT1Q01538 1121 aa17.64■□□□□ 0.41
LHX4-201ENST00000263726 ZEB1P37275 1124 aaPredicted RBP17.59■□□□□ 0.41
LHX4-201ENST00000263726 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
LHX4-201ENST00000263726 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.36
LHX4-201ENST00000263726 EHMT2Q96KQ7 1210 aa17.29■□□□□ 0.36
LHX4-201ENST00000263726 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
LHX4-201ENST00000263726 CHIC1Q5VXU3 224 aa17.13■□□□□ 0.33
LHX4-201ENST00000263726 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
LHX4-201ENST00000263726 CCER1Q8TC90 406 aaPredicted RBP17.09■□□□□ 0.33
LHX4-201ENST00000263726 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
LHX4-201ENST00000263726 LOC105371045A0A1W2PR82 267 aa16.93■□□□□ 0.3
LHX4-201ENST00000263726 YTHDC1Q96MU7 727 aaKnown RBP16.89■□□□□ 0.29
LHX4-201ENST00000263726 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
LHX4-201ENST00000263726 APLP2Q06481 763 aa16.76■□□□□ 0.27
LHX4-201ENST00000263726 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
LHX4-201ENST00000263726 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
LHX4-201ENST00000263726 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
LHX4-201ENST00000263726 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
LHX4-201ENST00000263726 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
LHX4-201ENST00000263726 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
LHX4-201ENST00000263726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.55■□□□□ 0.24
LHX4-201ENST00000263726 NEFLP07196 543 aa16.49■□□□□ 0.23
LHX4-201ENST00000263726 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
LHX4-201ENST00000263726 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
LHX4-201ENST00000263726 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
LHX4-201ENST00000263726 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.21
LHX4-201ENST00000263726 ZNF316A6NFI3 1004 aaPredicted RBP16.28■□□□□ 0.2
LHX4-201ENST00000263726 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
LHX4-201ENST00000263726 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
LHX4-201ENST00000263726 ZCCHC6Q5VYS8 1495 aaKnown RBP16.16■□□□□ 0.18
LHX4-201ENST00000263726 CLSPNQ9HAW4 1339 aa16.1■□□□□ 0.17
LHX4-201ENST00000263726 BCANQ96GW7 911 aa16.02■□□□□ 0.16
LHX4-201ENST00000263726 ITGAEP38570 1179 aa15.89■□□□□ 0.13
LHX4-201ENST00000263726 ATP1B4Q9UN42 357 aaPredicted RBP15.87■□□□□ 0.13
LHX4-201ENST00000263726 MIER1Q8N108 512 aa15.86■□□□□ 0.13
LHX4-201ENST00000263726 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
LHX4-201ENST00000263726 CDK11AQ9UQ88 783 aaPredicted RBP15.84■□□□□ 0.13
LHX4-201ENST00000263726 ANP32EQ9BTT0 268 aa15.82■□□□□ 0.12
LHX4-201ENST00000263726 FKBP8Q14318 412 aa15.76■□□□□ 0.11
LHX4-201ENST00000263726 ANP32CO43423 234 aa15.74■□□□□ 0.11
LHX4-201ENST00000263726 DAXXQ9UER7 740 aaPredicted RBP15.7■□□□□ 0.1
LHX4-201ENST00000263726 MYT1LQ9UL68 1186 aa15.67■□□□□ 0.1
LHX4-201ENST00000263726 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
LHX4-201ENST00000263726 BCL11AQ9H165 835 aa15.63■□□□□ 0.09
LHX4-201ENST00000263726 SUPT16HQ9Y5B9 1047 aaKnown RBP15.61■□□□□ 0.09
LHX4-201ENST00000263726 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
LHX4-201ENST00000263726 FAM50AQ14320 339 aaKnown RBP15.54■□□□□ 0.08
LHX4-201ENST00000263726 RSF1Q96T23 1441 aaPredicted RBP15.52■□□□□ 0.07
LHX4-201ENST00000263726 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
LHX4-201ENST00000263726 ANP32AP39687 249 aaKnown RBP15.51■□□□□ 0.07
LHX4-201ENST00000263726 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
LHX4-201ENST00000263726 DDX10Q13206 875 aaKnown RBP15.46■□□□□ 0.07
LHX4-201ENST00000263726 CNGB1Q14028 1251 aaPredicted RBP15.44■□□□□ 0.06
LHX4-201ENST00000263726 RB1CC1Q8TDY2 1594 aa15.43■□□□□ 0.06
LHX4-201ENST00000263726 TRIM52Q96A61 297 aa15.42■□□□□ 0.06
LHX4-201ENST00000263726 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
LHX4-201ENST00000263726 TSHZ2Q9NRE2 1034 aa15.39■□□□□ 0.05
LHX4-201ENST00000263726 NBR1Q14596 966 aa15.39■□□□□ 0.05
LHX4-201ENST00000263726 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
LHX4-201ENST00000263726 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
LHX4-201ENST00000263726 EEA1Q15075 1411 aa15.35■□□□□ 0.05
LHX4-201ENST00000263726 CLIP1P30622 1438 aa15.34■□□□□ 0.05
LHX4-201ENST00000263726 ABCC9O60706 1549 aa15.33■□□□□ 0.05
LHX4-201ENST00000263726 RBM19Q9Y4C8 960 aaKnown RBP15.3■□□□□ 0.04
LHX4-201ENST00000263726 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
LHX4-201ENST00000263726 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
LHX4-201ENST00000263726 IRX6P78412 446 aaPredicted RBP15.28■□□□□ 0.04
LHX4-201ENST00000263726 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
LHX4-201ENST00000263726 EIF5BO60841 1220 aaKnown RBP15.27■□□□□ 0.03
LHX4-201ENST00000263726 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
LHX4-201ENST00000263726 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
LHX4-201ENST00000263726 DEKP35659 375 aaKnown RBP15.17■□□□□ 0.02
LHX4-201ENST00000263726 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
LHX4-201ENST00000263726 HIRIP3Q9BW71 556 aaPredicted RBP15.16■□□□□ 0.02
LHX4-201ENST00000263726 NOP58Q9Y2X3 529 aaKnown RBP15.15■□□□□ 0.02
LHX4-201ENST00000263726 WRNQ14191 1432 aaPredicted RBP eCLIP15.14■□□□□ 0.01
LHX4-201ENST00000263726 PPP4R2Q9NY27 417 aa15.13■□□□□ 0.01
LHX4-201ENST00000263726 GLIPR1L2Q4G1C9 344 aa15.11■□□□□ 0.01
LHX4-201ENST00000263726 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
LHX4-201ENST00000263726 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
LHX4-201ENST00000263726 SOGA1O94964 1423 aa15.07■□□□□ 0
LHX4-201ENST00000263726 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
LHX4-201ENST00000263726 PABPN1Q86U42 306 aaKnown RBP eCLIP15.07■□□□□ 0
LHX4-201ENST00000263726 P3H3Q8IVL6 736 aa15.05■□□□□ -0
LHX4-201ENST00000263726 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
LHX4-201ENST00000263726 RTN4Q9NQC3 1192 aaKnown RBP15□□□□□ -0.01
LHX4-201ENST00000263726 DDRGK1Q96HY6 314 aa15□□□□□ -0.01
LHX4-201ENST00000263726 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
LHX4-201ENST00000263726 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
LHX4-201ENST00000263726 CCDC88BA6NC98 1476 aa14.98□□□□□ -0.01
LHX4-201ENST00000263726 ERICH6BQ5W0A0 696 aa14.98□□□□□ -0.01
LHX4-201ENST00000263726 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
LHX4-201ENST00000263726 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms