RNA–Protein interactions for RNA: ENST00000354371.6

COPS8-201, Transcript of COP9 signalosome subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS8, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-201ENST00000354371 NISCHQ9Y2I1 1504 aa20.22■□□□□ 0.83
COPS8-201ENST00000354371 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
COPS8-201ENST00000354371 HRCP23327 699 aa19.43■□□□□ 0.7
COPS8-201ENST00000354371 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
COPS8-201ENST00000354371 PPARGC1BQ86YN6 1023 aaKnown RBP19.05■□□□□ 0.64
COPS8-201ENST00000354371 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
COPS8-201ENST00000354371 SUPT5HO00267 1087 aaKnown RBP18.89■□□□□ 0.61
COPS8-201ENST00000354371 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
COPS8-201ENST00000354371 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
COPS8-201ENST00000354371 PCGF6Q9BYE7 350 aa18.63■□□□□ 0.57
COPS8-201ENST00000354371 MYT1Q01538 1121 aa18.49■□□□□ 0.55
COPS8-201ENST00000354371 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
COPS8-201ENST00000354371 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.52
COPS8-201ENST00000354371 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
COPS8-201ENST00000354371 CHIC1Q5VXU3 224 aa18.17■□□□□ 0.5
COPS8-201ENST00000354371 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
COPS8-201ENST00000354371 ACIN1Q9UKV3 1341 aaKnown RBP17.98■□□□□ 0.47
COPS8-201ENST00000354371 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
COPS8-201ENST00000354371 GTF3C3Q9Y5Q9 886 aa17.81■□□□□ 0.44
COPS8-201ENST00000354371 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
COPS8-201ENST00000354371 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
COPS8-201ENST00000354371 LOC105371045A0A1W2PR82 267 aa17.76■□□□□ 0.43
COPS8-201ENST00000354371 TTBK1Q5TCY1 1321 aaPredicted RBP17.68■□□□□ 0.42
COPS8-201ENST00000354371 BCL11AQ9H165 835 aa17.55■□□□□ 0.4
COPS8-201ENST00000354371 RANGAP1P46060 587 aaPredicted RBP17.36■□□□□ 0.37
COPS8-201ENST00000354371 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
COPS8-201ENST00000354371 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
COPS8-201ENST00000354371 DIEXFQ68CQ4 756 aaKnown RBP17.31■□□□□ 0.36
COPS8-201ENST00000354371 PRKCSHP14314 528 aaPredicted RBP17.3■□□□□ 0.36
COPS8-201ENST00000354371 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
COPS8-201ENST00000354371 ABCC9O60706 1549 aa17.2■□□□□ 0.34
COPS8-201ENST00000354371 CCER1Q8TC90 406 aaPredicted RBP17.2■□□□□ 0.34
COPS8-201ENST00000354371 ANP32EQ9BTT0 268 aa17.19■□□□□ 0.34
COPS8-201ENST00000354371 YTHDC1Q96MU7 727 aaKnown RBP17.16■□□□□ 0.34
COPS8-201ENST00000354371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
COPS8-201ENST00000354371 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
COPS8-201ENST00000354371 PABPN1Q86U42 306 aaKnown RBP eCLIP17.07■□□□□ 0.32
COPS8-201ENST00000354371 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
COPS8-201ENST00000354371 APLP2Q06481 763 aa16.99■□□□□ 0.31
COPS8-201ENST00000354371 MIER1Q8N108 512 aa16.94■□□□□ 0.3
COPS8-201ENST00000354371 SUPT16HQ9Y5B9 1047 aaKnown RBP16.93■□□□□ 0.3
COPS8-201ENST00000354371 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
COPS8-201ENST00000354371 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
COPS8-201ENST00000354371 ATP1B4Q9UN42 357 aaPredicted RBP16.8■□□□□ 0.28
COPS8-201ENST00000354371 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
COPS8-201ENST00000354371 ERICH6Q7L0X2 663 aa16.66■□□□□ 0.26
COPS8-201ENST00000354371 MSH5O43196 834 aa16.6■□□□□ 0.25
COPS8-201ENST00000354371 HNRNPUL2Q1KMD3 747 aaKnown RBP16.57■□□□□ 0.24
COPS8-201ENST00000354371 RB1CC1Q8TDY2 1594 aa16.57■□□□□ 0.24
COPS8-201ENST00000354371 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
COPS8-201ENST00000354371 ITGAEP38570 1179 aa16.52■□□□□ 0.24
COPS8-201ENST00000354371 RBM19Q9Y4C8 960 aaKnown RBP16.49■□□□□ 0.23
COPS8-201ENST00000354371 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
COPS8-201ENST00000354371 NEFLP07196 543 aa16.47■□□□□ 0.23
COPS8-201ENST00000354371 ANO8Q9HCE9 1232 aaPredicted RBP16.45■□□□□ 0.22
COPS8-201ENST00000354371 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
COPS8-201ENST00000354371 EIF4G1Q04637 1599 aaKnown RBP16.31■□□□□ 0.2
COPS8-201ENST00000354371 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
COPS8-201ENST00000354371 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
COPS8-201ENST00000354371 BCANQ96GW7 911 aa16.27■□□□□ 0.19
COPS8-201ENST00000354371 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
COPS8-201ENST00000354371 FANCIQ9NVI1 1328 aa16.23■□□□□ 0.19
COPS8-201ENST00000354371 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
COPS8-201ENST00000354371 FKBP8Q14318 412 aa16.18■□□□□ 0.18
COPS8-201ENST00000354371 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
COPS8-201ENST00000354371 P3H3Q8IVL6 736 aa16.12■□□□□ 0.17
COPS8-201ENST00000354371 UBE2Q2Q8WVN8 375 aa16.12■□□□□ 0.17
COPS8-201ENST00000354371 POLR3GLQ9BT43 218 aa16.11■□□□□ 0.17
COPS8-201ENST00000354371 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
COPS8-201ENST00000354371 TNIKQ9UKE5 1360 aa16.06■□□□□ 0.16
COPS8-201ENST00000354371 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
COPS8-201ENST00000354371 CCDC136Q96JN2 1154 aa16.05■□□□□ 0.16
COPS8-201ENST00000354371 DHX57Q6P158 1386 aaKnown RBP16.05■□□□□ 0.16
COPS8-201ENST00000354371 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
COPS8-201ENST00000354371 NACADO15069 1562 aa16.01■□□□□ 0.15
COPS8-201ENST00000354371 ERICH6BQ5W0A0 696 aa16■□□□□ 0.15
COPS8-201ENST00000354371 CCDC88BA6NC98 1476 aa16■□□□□ 0.15
COPS8-201ENST00000354371 MYT1LQ9UL68 1186 aa15.99■□□□□ 0.15
COPS8-201ENST00000354371 FBLN2P98095 1184 aa15.97■□□□□ 0.15
COPS8-201ENST00000354371 FAM50AQ14320 339 aaKnown RBP15.94■□□□□ 0.14
COPS8-201ENST00000354371 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
COPS8-201ENST00000354371 SOGA1O94964 1423 aa15.93■□□□□ 0.14
COPS8-201ENST00000354371 WIZO95785 1651 aa15.91■□□□□ 0.14
COPS8-201ENST00000354371 RUSC2Q8N2Y8 1516 aa15.9■□□□□ 0.14
COPS8-201ENST00000354371 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
COPS8-201ENST00000354371 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
COPS8-201ENST00000354371 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.83■□□□□ 0.12
COPS8-201ENST00000354371 CUX2O14529 1486 aa15.8■□□□□ 0.12
COPS8-201ENST00000354371 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
COPS8-201ENST00000354371 CLIP1P30622 1438 aa15.8■□□□□ 0.12
COPS8-201ENST00000354371 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
COPS8-201ENST00000354371 BAZ1AQ9NRL2 1556 aaPredicted RBP15.79■□□□□ 0.12
COPS8-201ENST00000354371 TRIM52Q96A61 297 aa15.77■□□□□ 0.11
COPS8-201ENST00000354371 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.11
COPS8-201ENST00000354371 DAXXQ9UER7 740 aaPredicted RBP15.76■□□□□ 0.11
COPS8-201ENST00000354371 NBR1Q14596 966 aa15.75■□□□□ 0.11
COPS8-201ENST00000354371 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
COPS8-201ENST00000354371 WDR97A6NE52 1622 aa15.74■□□□□ 0.11
COPS8-201ENST00000354371 VPS8Q8N3P4 1428 aa15.74■□□□□ 0.11
COPS8-201ENST00000354371 NOP58Q9Y2X3 529 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms