Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNA3P52797 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 HELLS-212ENST00000630929 400 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
EFNA3P52797 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNA3P52797 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
EFNA3P52797 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNA3P52797 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
EFNA3P52797 FMO6P-201ENST00000236166 1620 ntBASIC13.1□□□□□ -0.31
EFNA3P52797 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNA3P52797 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 AC093462.1-201ENST00000621167 1683 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNA3P52797 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNA3P52797 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 CSNK1G2P1-201ENST00000442675 955 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNA3P52797 AC079112.1-201ENST00000454972 939 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 RN7SL357P-201ENST00000581065 298 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 MIR7845-201ENST00000618396 99 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.09□□□□□ -0.31
EFNA3P52797 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNA3P52797 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNA3P52797 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNA3P52797 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.08□□□□□ -0.31
EFNA3P52797 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
EFNA3P52797 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
EFNA3P52797 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
EFNA3P52797 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.08□□□□□ -0.31
EFNA3P52797 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.08□□□□□ -0.31
EFNA3P52797 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
EFNA3P52797 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
EFNA3P52797 AC011474.4-201ENST00000623523 2076 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.08□□□□□ -0.32
EFNA3P52797 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
EFNA3P52797 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 PEG13-201ENST00000631594 5667 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
EFNA3P52797 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 LYPLA2P1-203ENST00000447689 696 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.08□□□□□ -0.32
EFNA3P52797 RN7SL8P-201ENST00000461771 266 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
EFNA3P52797 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.08□□□□□ -0.32
EFNA3P52797 NUDT4P2-201ENST00000578341 546 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 RN7SL470P-201ENST00000583069 259 ntBASIC13.08□□□□□ -0.32
EFNA3P52797 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.08□□□□□ -0.32
EFNA3P52797 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms