Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RASGRP4-202ENST00000426920 2650 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 MSH5-205ENST00000395853 2704 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 MPO-201ENST00000225275 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 LONRF2P2-201ENST00000439212 571 ntBASIC8.93□□□□□ -0.98
PCP4P48539 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 THA1P-201ENST00000590384 1145 ntBASIC8.93□□□□□ -0.98
PCP4P48539 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 BBS9-204ENST00000396127 3914 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
PCP4P48539 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 LAMB3-203ENST00000391911 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 PYHIN1-201ENST00000368135 1662 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 AC010729.1-201ENST00000413960 1746 ntTSL 3 BASIC8.93□□□□□ -0.98
PCP4P48539 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 NDP-201ENST00000378062 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 TCAIM-205ENST00000417237 1844 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 ZNF250-202ENST00000417550 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 XRCC6-205ENST00000405878 2200 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 EZH2-205ENST00000476773 2572 ntTSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 AC091825.1-201ENST00000622952 2621 ntBASIC8.93□□□□□ -0.98
PCP4P48539 TYRP1-203ENST00000388918 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 GPATCH2-201ENST00000366934 3218 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 FTX-215ENST00000638681 9771 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 SNHG16-201ENST00000448136 3607 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 ERVMER34-1-202ENST00000443173 3830 ntAPPRIS P1 TSL 3 BASIC8.93□□□□□ -0.98
PCP4P48539 AC068448.1-201ENST00000623902 3925 ntBASIC8.93□□□□□ -0.98
PCP4P48539 STAG3-201ENST00000317296 4198 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 TCF12-202ENST00000333725 4719 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC8.93□□□□□ -0.98
PCP4P48539 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
PCP4P48539 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
PCP4P48539 ALPK1-205ENST00000504176 5203 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 TCF12-204ENST00000438423 4786 ntAPPRIS P4 TSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 STXBP1-218ENST00000637173 4193 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 AC040162.3-201ENST00000572067 3907 ntBASIC8.92□□□□□ -0.98
PCP4P48539 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 TUT1-205ENST00000476907 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 COX15-202ENST00000370483 2788 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 LINC00994-201ENST00000485805 2129 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 SLC30A9-201ENST00000264451 6218 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 OAS2-203ENST00000449768 2072 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 ZFP37-202ENST00000553380 1969 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 AC002101.1-201ENST00000564021 1990 ntTSL 3 BASIC8.92□□□□□ -0.98
PCP4P48539 RASSF8-203ENST00000405154 5510 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 COPS7A-203ENST00000534877 1707 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 SH3BGRL2-201ENST00000369838 4653 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC8.92□□□□□ -0.98
PCP4P48539 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 GHSR-202ENST00000427970 912 ntBASIC8.92□□□□□ -0.98
PCP4P48539 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC8.92□□□□□ -0.98
PCP4P48539 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 MIR4313-201ENST00000580760 101 ntBASIC8.92□□□□□ -0.98
PCP4P48539 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 INVS-202ENST00000262457 3709 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 HHAT-208ENST00000545154 3507 ntTSL 2 BASIC8.92□□□□□ -0.98
PCP4P48539 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 CCDC174-201ENST00000303688 2714 ntTSL 5 BASIC8.92□□□□□ -0.98
PCP4P48539 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
PCP4P48539 SLC13A3-201ENST00000279027 4017 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms