RNA–Protein interactions for RNA: ENST00000317296.9

STAG3-201, Transcript of stromal antigen 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STAG3, Length 4,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-201ENST00000317296 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
STAG3-201ENST00000317296 NISCHQ9Y2I1 1504 aa18.69■□□□□ 0.58
STAG3-201ENST00000317296 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
STAG3-201ENST00000317296 SUPT5HO00267 1087 aaKnown RBP17.22■□□□□ 0.35
STAG3-201ENST00000317296 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
STAG3-201ENST00000317296 ABCC9O60706 1549 aa16.51■□□□□ 0.23
STAG3-201ENST00000317296 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
STAG3-201ENST00000317296 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
STAG3-201ENST00000317296 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
STAG3-201ENST00000317296 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
STAG3-201ENST00000317296 APLP2Q06481 763 aa16.05■□□□□ 0.16
STAG3-201ENST00000317296 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
STAG3-201ENST00000317296 HRCP23327 699 aa16■□□□□ 0.15
STAG3-201ENST00000317296 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
STAG3-201ENST00000317296 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
STAG3-201ENST00000317296 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
STAG3-201ENST00000317296 UBTFP17480 764 aaKnown RBP15.8■□□□□ 0.12
STAG3-201ENST00000317296 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
STAG3-201ENST00000317296 MYT1Q01538 1121 aa15.73■□□□□ 0.11
STAG3-201ENST00000317296 CCDC180Q9P1Z9 1646 aa15.67■□□□□ 0.1
STAG3-201ENST00000317296 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
STAG3-201ENST00000317296 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.6■□□□□ 0.09
STAG3-201ENST00000317296 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
STAG3-201ENST00000317296 FBLN2P98095 1184 aa15.5■□□□□ 0.07
STAG3-201ENST00000317296 MYT1LQ9UL68 1186 aa15.5■□□□□ 0.07
STAG3-201ENST00000317296 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.07
STAG3-201ENST00000317296 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
STAG3-201ENST00000317296 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
STAG3-201ENST00000317296 CENPBP07199 599 aaPredicted RBP15.38■□□□□ 0.05
STAG3-201ENST00000317296 TRIM26Q12899 539 aaPredicted RBP15.28■□□□□ 0.04
STAG3-201ENST00000317296 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
STAG3-201ENST00000317296 ITGAEP38570 1179 aa15.17■□□□□ 0.02
STAG3-201ENST00000317296 LOC105371045A0A1W2PR82 267 aa15.14■□□□□ 0.01
STAG3-201ENST00000317296 SCAF1Q9H7N4 1312 aaKnown RBP15.12■□□□□ 0.01
STAG3-201ENST00000317296 DCAF1Q9Y4B6 1507 aa15.12■□□□□ 0.01
STAG3-201ENST00000317296 CCER1Q8TC90 406 aaPredicted RBP15.08■□□□□ 0
STAG3-201ENST00000317296 YTHDC1Q96MU7 727 aaKnown RBP15.05■□□□□ 0
STAG3-201ENST00000317296 GTF3C3Q9Y5Q9 886 aa15.04■□□□□ -0
STAG3-201ENST00000317296 ARID3CA6NKF2 412 aa15.02□□□□□ -0.01
STAG3-201ENST00000317296 NACADO15069 1562 aa15.01□□□□□ -0.01
STAG3-201ENST00000317296 P3H3Q8IVL6 736 aa14.99□□□□□ -0.01
STAG3-201ENST00000317296 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
STAG3-201ENST00000317296 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
STAG3-201ENST00000317296 CHMP7Q8WUX9 453 aaPredicted RBP14.89□□□□□ -0.03
STAG3-201ENST00000317296 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
STAG3-201ENST00000317296 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
STAG3-201ENST00000317296 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
STAG3-201ENST00000317296 RSF1Q96T23 1441 aaPredicted RBP14.83□□□□□ -0.03
STAG3-201ENST00000317296 NEUROD1Q13562 356 aa14.82□□□□□ -0.04
STAG3-201ENST00000317296 ERCC6Q03468 1493 aa14.81□□□□□ -0.04
STAG3-201ENST00000317296 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
STAG3-201ENST00000317296 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
STAG3-201ENST00000317296 POLR3GLQ9BT43 218 aa14.75□□□□□ -0.05
STAG3-201ENST00000317296 ZNF777Q9ULD5 760 aaPredicted RBP14.74□□□□□ -0.05
STAG3-201ENST00000317296 CDK11AQ9UQ88 783 aaPredicted RBP14.74□□□□□ -0.05
STAG3-201ENST00000317296 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
STAG3-201ENST00000317296 TRIM52Q96A61 297 aa14.72□□□□□ -0.05
STAG3-201ENST00000317296 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
STAG3-201ENST00000317296 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
STAG3-201ENST00000317296 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
STAG3-201ENST00000317296 BCANQ96GW7 911 aa14.63□□□□□ -0.07
STAG3-201ENST00000317296 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
STAG3-201ENST00000317296 CNGB1Q14028 1251 aaPredicted RBP14.6□□□□□ -0.07
STAG3-201ENST00000317296 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
STAG3-201ENST00000317296 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
STAG3-201ENST00000317296 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
STAG3-201ENST00000317296 ZNF326Q5BKZ1 582 aaKnown RBP14.5□□□□□ -0.09
STAG3-201ENST00000317296 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
STAG3-201ENST00000317296 DNAJC5BQ9UF47 199 aa14.48□□□□□ -0.09
STAG3-201ENST00000317296 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
STAG3-201ENST00000317296 NEFLP07196 543 aa14.45□□□□□ -0.1
STAG3-201ENST00000317296 CHGAP10645 457 aaKnown RBP14.44□□□□□ -0.1
STAG3-201ENST00000317296 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
STAG3-201ENST00000317296 ZNF316A6NFI3 1004 aaPredicted RBP14.44□□□□□ -0.1
STAG3-201ENST00000317296 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
STAG3-201ENST00000317296 PLEKHD1A6NEE1 506 aa14.41□□□□□ -0.1
STAG3-201ENST00000317296 TSPY4P0CV99 314 aa14.38□□□□□ -0.11
STAG3-201ENST00000317296 TSPY10P0CW01 314 aa14.38□□□□□ -0.11
STAG3-201ENST00000317296 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.37□□□□□ -0.11
STAG3-201ENST00000317296 ARID4BQ4LE39 1312 aaPredicted RBP14.37□□□□□ -0.11
STAG3-201ENST00000317296 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
STAG3-201ENST00000317296 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
STAG3-201ENST00000317296 MTUS2Q5JR59 1369 aa14.33□□□□□ -0.12
STAG3-201ENST00000317296 SMARCA2P51531 1590 aa14.33□□□□□ -0.12
STAG3-201ENST00000317296 BCL11AQ9H165 835 aa14.32□□□□□ -0.12
STAG3-201ENST00000317296 TDRD9Q8NDG6 1382 aaKnown RBP14.31□□□□□ -0.12
STAG3-201ENST00000317296 WIZO95785 1651 aa14.31□□□□□ -0.12
STAG3-201ENST00000317296 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
STAG3-201ENST00000317296 ANP32EQ9BTT0 268 aa14.27□□□□□ -0.12
STAG3-201ENST00000317296 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
STAG3-201ENST00000317296 EEA1Q15075 1411 aa14.26□□□□□ -0.13
STAG3-201ENST00000317296 CUX2O14529 1486 aa14.24□□□□□ -0.13
STAG3-201ENST00000317296 MIER1Q8N108 512 aa14.24□□□□□ -0.13
STAG3-201ENST00000317296 ATAD2BQ9ULI0 1458 aa14.22□□□□□ -0.13
STAG3-201ENST00000317296 SOGA1O94964 1423 aa14.22□□□□□ -0.13
STAG3-201ENST00000317296 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
STAG3-201ENST00000317296 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.14
STAG3-201ENST00000317296 CYB5RLQ6IPT4 315 aa14.2□□□□□ -0.14
STAG3-201ENST00000317296 CARMIL1Q5VZK9 1371 aa14.19□□□□□ -0.14
STAG3-201ENST00000317296 CLIP1P30622 1438 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms