RNA–Protein interactions for RNA: ENST00000160373.7

CTTNBP2-201, Transcript of cortactin binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTTNBP2, Length 5,970 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-201ENST00000160373 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
CTTNBP2-201ENST00000160373 SUPT5HO00267 1087 aaKnown RBP19.94■□□□□ 0.78
CTTNBP2-201ENST00000160373 SHROOM4Q9ULL8 1493 aa19.75■□□□□ 0.75
CTTNBP2-201ENST00000160373 EHMT2Q96KQ7 1210 aa19.69■□□□□ 0.74
CTTNBP2-201ENST00000160373 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
CTTNBP2-201ENST00000160373 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
CTTNBP2-201ENST00000160373 TTBK1Q5TCY1 1321 aaPredicted RBP18.88■□□□□ 0.61
CTTNBP2-201ENST00000160373 RANGAP1P46060 587 aaPredicted RBP18.82■□□□□ 0.6
CTTNBP2-201ENST00000160373 APLP2Q06481 763 aa18.65■□□□□ 0.58
CTTNBP2-201ENST00000160373 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.55
CTTNBP2-201ENST00000160373 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
CTTNBP2-201ENST00000160373 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
CTTNBP2-201ENST00000160373 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
CTTNBP2-201ENST00000160373 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
CTTNBP2-201ENST00000160373 MYT1LQ9UL68 1186 aa17.88■□□□□ 0.45
CTTNBP2-201ENST00000160373 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.87■□□□□ 0.45
CTTNBP2-201ENST00000160373 HNRNPUL2Q1KMD3 747 aaKnown RBP17.87■□□□□ 0.45
CTTNBP2-201ENST00000160373 CCER1Q8TC90 406 aaPredicted RBP17.87■□□□□ 0.45
CTTNBP2-201ENST00000160373 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
CTTNBP2-201ENST00000160373 ITGAEP38570 1179 aa17.78■□□□□ 0.44
CTTNBP2-201ENST00000160373 CHIC1Q5VXU3 224 aa17.78■□□□□ 0.44
CTTNBP2-201ENST00000160373 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
CTTNBP2-201ENST00000160373 ABCC9O60706 1549 aa17.7■□□□□ 0.42
CTTNBP2-201ENST00000160373 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
CTTNBP2-201ENST00000160373 POLR3GLQ9BT43 218 aa17.57■□□□□ 0.4
CTTNBP2-201ENST00000160373 LOC105371045A0A1W2PR82 267 aa17.57■□□□□ 0.4
CTTNBP2-201ENST00000160373 YTHDC1Q96MU7 727 aaKnown RBP17.55■□□□□ 0.4
CTTNBP2-201ENST00000160373 FBLN2P98095 1184 aa17.4■□□□□ 0.38
CTTNBP2-201ENST00000160373 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
CTTNBP2-201ENST00000160373 ZEB1P37275 1124 aaPredicted RBP17.29■□□□□ 0.36
CTTNBP2-201ENST00000160373 CENPBP07199 599 aaPredicted RBP17.29■□□□□ 0.36
CTTNBP2-201ENST00000160373 ARID3CA6NKF2 412 aa17.23■□□□□ 0.35
CTTNBP2-201ENST00000160373 ERICH6Q7L0X2 663 aa17.23■□□□□ 0.35
CTTNBP2-201ENST00000160373 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
CTTNBP2-201ENST00000160373 NEFLP07196 543 aa17.15■□□□□ 0.34
CTTNBP2-201ENST00000160373 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
CTTNBP2-201ENST00000160373 P3H3Q8IVL6 736 aa17.08■□□□□ 0.33
CTTNBP2-201ENST00000160373 TRIM52Q96A61 297 aa17.07■□□□□ 0.32
CTTNBP2-201ENST00000160373 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
CTTNBP2-201ENST00000160373 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
CTTNBP2-201ENST00000160373 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
CTTNBP2-201ENST00000160373 HRCP23327 699 aa16.9■□□□□ 0.3
CTTNBP2-201ENST00000160373 BCANQ96GW7 911 aa16.88■□□□□ 0.29
CTTNBP2-201ENST00000160373 ZNF777Q9ULD5 760 aaPredicted RBP16.86■□□□□ 0.29
CTTNBP2-201ENST00000160373 SLC24A1O60721 1099 aa16.76■□□□□ 0.27
CTTNBP2-201ENST00000160373 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
CTTNBP2-201ENST00000160373 DAXXQ9UER7 740 aaPredicted RBP16.67■□□□□ 0.26
CTTNBP2-201ENST00000160373 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
CTTNBP2-201ENST00000160373 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
CTTNBP2-201ENST00000160373 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
CTTNBP2-201ENST00000160373 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
CTTNBP2-201ENST00000160373 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
CTTNBP2-201ENST00000160373 ESF1Q9H501 851 aaKnown RBP16.59■□□□□ 0.25
CTTNBP2-201ENST00000160373 DIEXFQ68CQ4 756 aaKnown RBP16.57■□□□□ 0.24
CTTNBP2-201ENST00000160373 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTTNBP2-201ENST00000160373 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.23
CTTNBP2-201ENST00000160373 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.48■□□□□ 0.23
CTTNBP2-201ENST00000160373 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
CTTNBP2-201ENST00000160373 MYT1Q01538 1121 aa16.46■□□□□ 0.23
CTTNBP2-201ENST00000160373 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
CTTNBP2-201ENST00000160373 CDK11AQ9UQ88 783 aaPredicted RBP16.44■□□□□ 0.22
CTTNBP2-201ENST00000160373 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
CTTNBP2-201ENST00000160373 ANP32CO43423 234 aa16.38■□□□□ 0.21
CTTNBP2-201ENST00000160373 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
CTTNBP2-201ENST00000160373 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
CTTNBP2-201ENST00000160373 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
CTTNBP2-201ENST00000160373 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
CTTNBP2-201ENST00000160373 NEFMP07197 916 aa16.29■□□□□ 0.2
CTTNBP2-201ENST00000160373 ZBTB47Q9UFB7 747 aaPredicted RBP16.28■□□□□ 0.2
CTTNBP2-201ENST00000160373 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
CTTNBP2-201ENST00000160373 A0A0G2JS52 829 aa16.27■□□□□ 0.2
CTTNBP2-201ENST00000160373 KDM2AQ9Y2K7 1162 aa16.27■□□□□ 0.2
CTTNBP2-201ENST00000160373 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
CTTNBP2-201ENST00000160373 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
CTTNBP2-201ENST00000160373 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
CTTNBP2-201ENST00000160373 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
CTTNBP2-201ENST00000160373 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
CTTNBP2-201ENST00000160373 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
CTTNBP2-201ENST00000160373 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
CTTNBP2-201ENST00000160373 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
CTTNBP2-201ENST00000160373 C14orf37Q86TY3 774 aa16.12■□□□□ 0.17
CTTNBP2-201ENST00000160373 MTUS2Q5JR59 1369 aa16.11■□□□□ 0.17
CTTNBP2-201ENST00000160373 DDX10Q13206 875 aaKnown RBP16.1■□□□□ 0.17
CTTNBP2-201ENST00000160373 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
CTTNBP2-201ENST00000160373 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
CTTNBP2-201ENST00000160373 GTF3C3Q9Y5Q9 886 aa16.09■□□□□ 0.17
CTTNBP2-201ENST00000160373 SENP3-EIF4A1A0A087X0R7 540 aa16.07■□□□□ 0.16
CTTNBP2-201ENST00000160373 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
CTTNBP2-201ENST00000160373 RTL5Q5HYW3 569 aaPredicted RBP16.06■□□□□ 0.16
CTTNBP2-201ENST00000160373 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
CTTNBP2-201ENST00000160373 ERCC6Q03468 1493 aa16.03■□□□□ 0.16
CTTNBP2-201ENST00000160373 PLEKHD1A6NEE1 506 aa16.02■□□□□ 0.15
CTTNBP2-201ENST00000160373 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
CTTNBP2-201ENST00000160373 NPM2Q86SE8 214 aaKnown RBP15.99■□□□□ 0.15
CTTNBP2-201ENST00000160373 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
CTTNBP2-201ENST00000160373 MLECQ14165 292 aa15.97■□□□□ 0.15
CTTNBP2-201ENST00000160373 TMC1Q8TDI8 760 aa15.95■□□□□ 0.14
CTTNBP2-201ENST00000160373 HAP1P54257 671 aaPredicted RBP15.92■□□□□ 0.14
CTTNBP2-201ENST00000160373 LMOD2Q6P5Q4 547 aa15.92■□□□□ 0.14
CTTNBP2-201ENST00000160373 CLIP1P30622 1438 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms