RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 DCAF8L2P0C7V8 631 aa20.11■□□□□ 0.81
RGPD2-201ENST00000398146 EHMT2Q96KQ7 1210 aa18.6■□□□□ 0.57
RGPD2-201ENST00000398146 SUPT5HO00267 1087 aaKnown RBP18.22■□□□□ 0.51
RGPD2-201ENST00000398146 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
RGPD2-201ENST00000398146 APLP2Q06481 763 aa17.92■□□□□ 0.46
RGPD2-201ENST00000398146 TTBK1Q5TCY1 1321 aaPredicted RBP17.85■□□□□ 0.45
RGPD2-201ENST00000398146 PELP1Q8IZL8 1130 aaKnown RBP17.82■□□□□ 0.44
RGPD2-201ENST00000398146 RANGAP1P46060 587 aaPredicted RBP17.8■□□□□ 0.44
RGPD2-201ENST00000398146 SHROOM4Q9ULL8 1493 aa17.78■□□□□ 0.44
RGPD2-201ENST00000398146 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.43
RGPD2-201ENST00000398146 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
RGPD2-201ENST00000398146 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
RGPD2-201ENST00000398146 ERICH6Q7L0X2 663 aa17.44■□□□□ 0.38
RGPD2-201ENST00000398146 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
RGPD2-201ENST00000398146 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
RGPD2-201ENST00000398146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
RGPD2-201ENST00000398146 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
RGPD2-201ENST00000398146 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
RGPD2-201ENST00000398146 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
RGPD2-201ENST00000398146 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
RGPD2-201ENST00000398146 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
RGPD2-201ENST00000398146 MYT1Q01538 1121 aa16.89■□□□□ 0.29
RGPD2-201ENST00000398146 NEFLP07196 543 aa16.8■□□□□ 0.28
RGPD2-201ENST00000398146 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
RGPD2-201ENST00000398146 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
RGPD2-201ENST00000398146 ITGAEP38570 1179 aa16.71■□□□□ 0.27
RGPD2-201ENST00000398146 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
RGPD2-201ENST00000398146 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
RGPD2-201ENST00000398146 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
RGPD2-201ENST00000398146 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
RGPD2-201ENST00000398146 BCANQ96GW7 911 aa16.56■□□□□ 0.24
RGPD2-201ENST00000398146 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
RGPD2-201ENST00000398146 BCL11AQ9H165 835 aa16.53■□□□□ 0.24
RGPD2-201ENST00000398146 NISCHQ9Y2I1 1504 aa16.51■□□□□ 0.23
RGPD2-201ENST00000398146 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
RGPD2-201ENST00000398146 FBLN2P98095 1184 aa16.31■□□□□ 0.2
RGPD2-201ENST00000398146 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
RGPD2-201ENST00000398146 ZBTB47Q9UFB7 747 aaPredicted RBP16.23■□□□□ 0.19
RGPD2-201ENST00000398146 A0A0G2JS52 829 aa16.18■□□□□ 0.18
RGPD2-201ENST00000398146 ZEB1P37275 1124 aaPredicted RBP16.17■□□□□ 0.18
RGPD2-201ENST00000398146 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
RGPD2-201ENST00000398146 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
RGPD2-201ENST00000398146 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
RGPD2-201ENST00000398146 SCAF1Q9H7N4 1312 aaKnown RBP16.11■□□□□ 0.17
RGPD2-201ENST00000398146 FAM50AQ14320 339 aaKnown RBP16.06■□□□□ 0.16
RGPD2-201ENST00000398146 PLEKHG5O94827 1062 aa16■□□□□ 0.15
RGPD2-201ENST00000398146 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
RGPD2-201ENST00000398146 NEFMP07197 916 aa15.98■□□□□ 0.15
RGPD2-201ENST00000398146 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
RGPD2-201ENST00000398146 STAG3Q9UJ98 1225 aa15.96■□□□□ 0.15
RGPD2-201ENST00000398146 RTL5Q5HYW3 569 aaPredicted RBP15.91■□□□□ 0.14
RGPD2-201ENST00000398146 NEUROD1Q13562 356 aa15.9■□□□□ 0.14
RGPD2-201ENST00000398146 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
RGPD2-201ENST00000398146 ZBTB7CA1YPR0 619 aa15.85■□□□□ 0.13
RGPD2-201ENST00000398146 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
RGPD2-201ENST00000398146 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
RGPD2-201ENST00000398146 SENP3Q9H4L4 574 aaPredicted RBP15.78■□□□□ 0.12
RGPD2-201ENST00000398146 TULP1O00294 542 aaPredicted RBP15.74■□□□□ 0.11
RGPD2-201ENST00000398146 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
RGPD2-201ENST00000398146 C14orf37Q86TY3 774 aa15.67■□□□□ 0.1
RGPD2-201ENST00000398146 HAP1P54257 671 aaPredicted RBP15.67■□□□□ 0.1
RGPD2-201ENST00000398146 NPM2Q86SE8 214 aaKnown RBP15.66■□□□□ 0.1
RGPD2-201ENST00000398146 P3H3Q8IVL6 736 aa15.64■□□□□ 0.09
RGPD2-201ENST00000398146 CDK11BP21127 795 aaKnown RBP15.63■□□□□ 0.09
RGPD2-201ENST00000398146 CDK11AQ9UQ88 783 aaPredicted RBP15.63■□□□□ 0.09
RGPD2-201ENST00000398146 ARXQ96QS3 562 aa15.62■□□□□ 0.09
RGPD2-201ENST00000398146 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
RGPD2-201ENST00000398146 TRIM26Q12899 539 aaPredicted RBP15.54■□□□□ 0.08
RGPD2-201ENST00000398146 LOC105371045A0A1W2PR82 267 aa15.52■□□□□ 0.08
RGPD2-201ENST00000398146 HSP90AA1P07900 732 aaKnown RBP15.52■□□□□ 0.07
RGPD2-201ENST00000398146 NPHP1O15259 732 aa15.51■□□□□ 0.07
RGPD2-201ENST00000398146 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
RGPD2-201ENST00000398146 ANP32CO43423 234 aa15.47■□□□□ 0.07
RGPD2-201ENST00000398146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.07
RGPD2-201ENST00000398146 ABCC9O60706 1549 aa15.41■□□□□ 0.06
RGPD2-201ENST00000398146 HRCP23327 699 aa15.4■□□□□ 0.06
RGPD2-201ENST00000398146 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
RGPD2-201ENST00000398146 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
RGPD2-201ENST00000398146 PPP1R15AO75807 674 aaPredicted RBP15.37■□□□□ 0.05
RGPD2-201ENST00000398146 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
RGPD2-201ENST00000398146 TAOK2Q9UL54 1235 aa15.36■□□□□ 0.05
RGPD2-201ENST00000398146 ANP32BQ92688 251 aaKnown RBP15.35■□□□□ 0.05
RGPD2-201ENST00000398146 DIEXFQ68CQ4 756 aaKnown RBP15.28■□□□□ 0.04
RGPD2-201ENST00000398146 CLSTN1O94985 981 aa15.26■□□□□ 0.03
RGPD2-201ENST00000398146 TPRNQ4KMQ1 711 aa15.22■□□□□ 0.03
RGPD2-201ENST00000398146 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
RGPD2-201ENST00000398146 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
RGPD2-201ENST00000398146 ANP32AP39687 249 aaKnown RBP15.18■□□□□ 0.02
RGPD2-201ENST00000398146 KCNH8Q96L42 1107 aa15.17■□□□□ 0.02
RGPD2-201ENST00000398146 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
RGPD2-201ENST00000398146 MYH16Q9H6N6 1097 aa15.14■□□□□ 0.01
RGPD2-201ENST00000398146 PPM1GO15355 546 aaPredicted RBP15.13■□□□□ 0.01
RGPD2-201ENST00000398146 CHIC2Q9UKJ5 165 aa15.12■□□□□ 0.01
RGPD2-201ENST00000398146 EIF5BO60841 1220 aaKnown RBP15.12■□□□□ 0.01
RGPD2-201ENST00000398146 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
RGPD2-201ENST00000398146 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
RGPD2-201ENST00000398146 PRM3Q9NNZ6 103 aa15.09■□□□□ 0.01
RGPD2-201ENST00000398146 FAM9BQ8IZU0 186 aa15.09■□□□□ 0.01
RGPD2-201ENST00000398146 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.09■□□□□ 0.01
RGPD2-201ENST00000398146 GOLGA2Q08379 1002 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms