Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC14.52□□□□□ -0.08
CD48P09326 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.52□□□□□ -0.08
CD48P09326 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD48P09326 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CD48P09326 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.52□□□□□ -0.09
CD48P09326 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 MIR1247-201ENST00000408206 136 ntBASIC14.52□□□□□ -0.09
CD48P09326 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 BX284668.4-201ENST00000453917 508 ntBASIC14.52□□□□□ -0.09
CD48P09326 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.52□□□□□ -0.09
CD48P09326 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.52□□□□□ -0.09
CD48P09326 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CD48P09326 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
CD48P09326 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.52□□□□□ -0.09
CD48P09326 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.52□□□□□ -0.09
CD48P09326 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CD48P09326 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CD48P09326 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD48P09326 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.51□□□□□ -0.09
CD48P09326 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 AC073150.1-201ENST00000450406 1084 ntBASIC14.51□□□□□ -0.09
CD48P09326 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.51□□□□□ -0.09
CD48P09326 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 NDUFB10P1-201ENST00000567319 521 ntBASIC14.51□□□□□ -0.09
CD48P09326 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.51□□□□□ -0.09
CD48P09326 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.51□□□□□ -0.09
CD48P09326 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CD48P09326 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CD48P09326 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CD48P09326 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CD48P09326 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CD48P09326 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CD48P09326 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CD48P09326 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms