Protein–RNA interactions for Protein: P30260

CDC27, Cell division cycle protein 27 homolog, humanhuman

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27P30260 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CDC27P30260 AL627231.1-201ENST00000394467 1125 ntBASIC16.22■□□□□ 0.19
CDC27P30260 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.22■□□□□ 0.19
CDC27P30260 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC27P30260 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.22■□□□□ 0.19
CDC27P30260 EEF1DP2-201ENST00000433698 843 ntBASIC16.22■□□□□ 0.19
CDC27P30260 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC27P30260 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC27P30260 MIR4265-201ENST00000582152 99 ntBASIC16.22■□□□□ 0.19
CDC27P30260 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 ST20-AS1-201ENST00000560255 4223 ntBASIC16.22■□□□□ 0.19
CDC27P30260 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC16.22■□□□□ 0.19
CDC27P30260 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CDC27P30260 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.22■□□□□ 0.19
CDC27P30260 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 PES1P2-201ENST00000449745 1735 ntBASIC16.22■□□□□ 0.19
CDC27P30260 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDC27P30260 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 PDXDC2P-206ENST00000534700 1315 ntBASIC16.21■□□□□ 0.19
CDC27P30260 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC27P30260 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CDC27P30260 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC27P30260 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CDC27P30260 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 RPL3P2-204ENST00000413027 1203 ntBASIC16.21■□□□□ 0.19
CDC27P30260 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC27P30260 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.21■□□□□ 0.19
CDC27P30260 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CDC27P30260 AC145285.5-201ENST00000562217 361 ntBASIC16.21■□□□□ 0.19
CDC27P30260 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.21■□□□□ 0.19
CDC27P30260 AC097376.2-205ENST00000610159 5334 ntBASIC16.21■□□□□ 0.19
CDC27P30260 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDC27P30260 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.21■□□□□ 0.19
CDC27P30260 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDC27P30260 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CDC27P30260 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC27P30260 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDC27P30260 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDC27P30260 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDC27P30260 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC27P30260 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.2■□□□□ 0.18
CDC27P30260 AC245140.2-201ENST00000624054 1939 ntBASIC16.2■□□□□ 0.18
CDC27P30260 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDC27P30260 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDC27P30260 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms