Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NUP43Q8NFH3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 OR8T1P-201ENST00000421347 918 ntBASIC13.17□□□□□ -0.3
NUP43Q8NFH3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AC005740.1-201ENST00000515639 522 ntBASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 KRT8P1-201ENST00000557533 1207 ntBASIC13.17□□□□□ -0.3
NUP43Q8NFH3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AL359845.1-201ENST00000458202 1648 ntBASIC13.17□□□□□ -0.3
NUP43Q8NFH3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.17□□□□□ -0.3
NUP43Q8NFH3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 FRMPD2B-201ENST00000431305 1347 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 PPT1-213ENST00000641319 2388 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AL157791.1-201ENST00000553667 1699 ntBASIC13.16□□□□□ -0.3
NUP43Q8NFH3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NUP43Q8NFH3 AC239868.1-201ENST00000369385 493 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms