Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 AC115284.2-201ENST00000624646 2054 ntBASIC14.6□□□□□ -0.07
CCDC25Q86WR0 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC25Q86WR0 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AC024075.2-201ENST00000598112 1473 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 DGCR5-201ENST00000399539 862 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AP001889.1-201ENST00000525414 633 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 RN7SL713P-201ENST00000582127 302 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 LINC02560-201ENST00000596379 459 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CR383656.2-201ENST00000548656 2254 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 AL008718.2-201ENST00000609206 1313 ntBASIC14.59□□□□□ -0.07
CCDC25Q86WR0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.59□□□□□ -0.07
CCDC25Q86WR0 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC25Q86WR0 AC010336.1-201ENST00000539278 4739 ntBASIC14.58□□□□□ -0.07
CCDC25Q86WR0 AC060814.4-201ENST00000594169 2163 ntBASIC14.58□□□□□ -0.07
CCDC25Q86WR0 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC25Q86WR0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
CCDC25Q86WR0 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.58□□□□□ -0.07
CCDC25Q86WR0 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CCDC25Q86WR0 AC108024.1-201ENST00000626286 1721 ntBASIC14.58□□□□□ -0.07
CCDC25Q86WR0 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 RCC2P1-201ENST00000452257 1476 ntBASIC14.58□□□□□ -0.08
CCDC25Q86WR0 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 AC026271.4-201ENST00000578214 1833 ntBASIC14.58□□□□□ -0.08
CCDC25Q86WR0 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 FAM197Y7-201ENST00000432892 766 ntBASIC14.58□□□□□ -0.08
CCDC25Q86WR0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CCDC25Q86WR0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms