Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 KRT8P43-201ENST00000406052 1458 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.48□□□□□ -0.25
RSPO4Q2I0M5 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SALL4P6-201ENST00000429385 1691 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 CCT8L1P-201ENST00000465400 1674 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC139143.1-201ENST00000441772 1207 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AL031673.1-201ENST00000611460 466 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 MIR6165-201ENST00000614803 84 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC139100.2-201ENST00000616901 662 ntBASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.47□□□□□ -0.25
RSPO4Q2I0M5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 AC069061.4-201ENST00000581294 1347 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 RNA5SP491-201ENST00000362936 118 ntBASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO4Q2I0M5 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms