RNA–Protein interactions for RNA: ENST00000564908.1

MSRB1-205, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-205ENST00000564908 NISCHQ9Y2I1 1504 aa31.62■■■□□ 2.65
MSRB1-205ENST00000564908 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
MSRB1-205ENST00000564908 ABCC9O60706 1549 aa27.94■■■□□ 2.06
MSRB1-205ENST00000564908 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
MSRB1-205ENST00000564908 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
MSRB1-205ENST00000564908 NACADO15069 1562 aa26.58■■□□□ 1.85
MSRB1-205ENST00000564908 MYO15BQ96JP2 1530 aa26.3■■□□□ 1.8
MSRB1-205ENST00000564908 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
MSRB1-205ENST00000564908 PABPN1Q86U42 306 aaKnown RBP eCLIP26.19■■□□□ 1.78
MSRB1-205ENST00000564908 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
MSRB1-205ENST00000564908 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
MSRB1-205ENST00000564908 UNC13AQ9UPW8 1703 aa26.04■■□□□ 1.76
MSRB1-205ENST00000564908 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
MSRB1-205ENST00000564908 SCRIBQ14160 1630 aa25.68■■□□□ 1.7
MSRB1-205ENST00000564908 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
MSRB1-205ENST00000564908 EIF4G1Q04637 1599 aaKnown RBP25.22■■□□□ 1.63
MSRB1-205ENST00000564908 CC2D2AQ9P2K1 1620 aa25.21■■□□□ 1.63
MSRB1-205ENST00000564908 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
MSRB1-205ENST00000564908 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
MSRB1-205ENST00000564908 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
MSRB1-205ENST00000564908 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
MSRB1-205ENST00000564908 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
MSRB1-205ENST00000564908 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
MSRB1-205ENST00000564908 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
MSRB1-205ENST00000564908 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
MSRB1-205ENST00000564908 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
MSRB1-205ENST00000564908 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
MSRB1-205ENST00000564908 NESP48681 1621 aa24.1■■□□□ 1.45
MSRB1-205ENST00000564908 WIZO95785 1651 aa24.08■■□□□ 1.44
MSRB1-205ENST00000564908 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
MSRB1-205ENST00000564908 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
MSRB1-205ENST00000564908 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
MSRB1-205ENST00000564908 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
MSRB1-205ENST00000564908 CUX2O14529 1486 aa23.89■■□□□ 1.42
MSRB1-205ENST00000564908 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
MSRB1-205ENST00000564908 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
MSRB1-205ENST00000564908 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.39
MSRB1-205ENST00000564908 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
MSRB1-205ENST00000564908 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
MSRB1-205ENST00000564908 CFTRP13569 1480 aa23.64■■□□□ 1.38
MSRB1-205ENST00000564908 CCDC88BA6NC98 1476 aa23.58■■□□□ 1.37
MSRB1-205ENST00000564908 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
MSRB1-205ENST00000564908 MRC2Q9UBG0 1479 aa23.56■■□□□ 1.36
MSRB1-205ENST00000564908 CEP164Q9UPV0 1460 aa23.52■■□□□ 1.36
MSRB1-205ENST00000564908 WDR62O43379 1518 aa23.45■■□□□ 1.34
MSRB1-205ENST00000564908 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
MSRB1-205ENST00000564908 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
MSRB1-205ENST00000564908 PRDM2Q13029 1718 aa23.28■■□□□ 1.32
MSRB1-205ENST00000564908 TOPBP1Q92547 1522 aa23.14■■□□□ 1.3
MSRB1-205ENST00000564908 ABCC8Q09428 1581 aa23.13■■□□□ 1.29
MSRB1-205ENST00000564908 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
MSRB1-205ENST00000564908 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
MSRB1-205ENST00000564908 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
MSRB1-205ENST00000564908 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
MSRB1-205ENST00000564908 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
MSRB1-205ENST00000564908 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.264e-8■■■■■ 64.5
MSRB1-205ENST00000564908 SOGA1O94964 1423 aa22.91■■□□□ 1.26
MSRB1-205ENST00000564908 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
MSRB1-205ENST00000564908 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
MSRB1-205ENST00000564908 CUX1P39880 1505 aa22.87■■□□□ 1.25
MSRB1-205ENST00000564908 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
MSRB1-205ENST00000564908 FGD5Q6ZNL6 1462 aa22.82■■□□□ 1.24
MSRB1-205ENST00000564908 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
MSRB1-205ENST00000564908 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
MSRB1-205ENST00000564908 FBLN2P98095 1184 aa22.75■■□□□ 1.23
MSRB1-205ENST00000564908 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
MSRB1-205ENST00000564908 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
MSRB1-205ENST00000564908 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
MSRB1-205ENST00000564908 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
MSRB1-205ENST00000564908 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
MSRB1-205ENST00000564908 CHD1O14646 1710 aa22.6■■□□□ 1.21
MSRB1-205ENST00000564908 ABCA10Q8WWZ4 1543 aa22.59■■□□□ 1.21
MSRB1-205ENST00000564908 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
MSRB1-205ENST00000564908 TOP2BQ02880 1626 aa22.55■■□□□ 1.2
MSRB1-205ENST00000564908 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
MSRB1-205ENST00000564908 SYNJ1O43426 1573 aa22.53■■□□□ 1.2
MSRB1-205ENST00000564908 RIMBP3CA6NJZ7 1639 aa22.52■■□□□ 1.2
MSRB1-205ENST00000564908 RIMBP3BA6NNM3 1639 aa22.52■■□□□ 1.2
MSRB1-205ENST00000564908 RIMBP3Q9UFD9 1639 aa22.52■■□□□ 1.2
MSRB1-205ENST00000564908 BIVM-ERCC5R4GMW8 1640 aa22.51■■□□□ 1.19
MSRB1-205ENST00000564908 ARHGEF11O15085 1522 aa22.5■■□□□ 1.19
MSRB1-205ENST00000564908 CYB5RLQ6IPT4 315 aa22.49■■□□□ 1.19
MSRB1-205ENST00000564908 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
MSRB1-205ENST00000564908 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
MSRB1-205ENST00000564908 PBRM1Q86U86 1689 aa22.44■■□□□ 1.18
MSRB1-205ENST00000564908 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
MSRB1-205ENST00000564908 ARAP1Q96P48 1450 aa22.31■■□□□ 1.16
MSRB1-205ENST00000564908 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
MSRB1-205ENST00000564908 GRIN2AQ12879 1464 aa22.29■■□□□ 1.16
MSRB1-205ENST00000564908 ERICH3Q5RHP9 1530 aa22.29■■□□□ 1.16
MSRB1-205ENST00000564908 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
MSRB1-205ENST00000564908 IGF1RP08069 1367 aa22.23■■□□□ 1.15
MSRB1-205ENST00000564908 NUP160Q12769 1436 aa22.23■■□□□ 1.15
MSRB1-205ENST00000564908 KIF27Q86VH2 1401 aa22.18■■□□□ 1.14
MSRB1-205ENST00000564908 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
MSRB1-205ENST00000564908 JPH4Q96JJ6 628 aa22.15■■□□□ 1.14
MSRB1-205ENST00000564908 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
MSRB1-205ENST00000564908 ERCC6L2Q5T890 1561 aa22.09■■□□□ 1.13
MSRB1-205ENST00000564908 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
MSRB1-205ENST00000564908 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms