Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AC092573.1-201ENST00000433054 884 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 RN7SL564P-201ENST00000496309 250 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 RPL17P45-201ENST00000586289 509 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AL049840.2-201ENST00000602722 535 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AC068587.10-201ENST00000641210 219 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 AL139424.3-202ENST00000641619 917 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 Z98885.3-201ENST00000624882 1757 ntBASIC20.25■□□□□ 0.83
SIN3AQ96ST3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SIN3AQ96ST3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AC073548.1-201ENST00000624088 1882 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ABCD1P2-201ENST00000429313 1601 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 FTX-216ENST00000638985 1367 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 HLA-DMA-203ENST00000395305 777 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AC007952.4-201ENST00000573866 637 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AC242376.2-201ENST00000619355 883 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AC108024.1-201ENST00000626286 1721 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIN3AQ96ST3 RCC2P5-201ENST00000492126 1487 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 AL359845.1-201ENST00000458202 1648 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 ODCP-201ENST00000459650 1639 ntBASIC20.24■□□□□ 0.83
SIN3AQ96ST3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AC020917.4-201ENST00000623994 1999 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 ERP29P1-201ENST00000442902 706 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.23■□□□□ 0.83
SIN3AQ96ST3 AC018638.5-201ENST00000450885 754 ntBASIC20.23■□□□□ 0.83
SIN3AQ96ST3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms