Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 MTHFD2P7-201ENST00000483867 983 ntBASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AC092910.2-201ENST00000491262 348 ntBASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AC093700.1-201ENST00000503348 717 ntBASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 PMEL-214ENST00000550447 901 ntTSL 3 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AC009041.4-201ENST00000620075 638 ntBASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
KLHDC9Q8NEP7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AL050341.2-201ENST00000567508 1541 ntBASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AL121949.3-201ENST00000406684 385 ntBASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AC233724.9-201ENST00000511694 407 ntBASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 LY6E-215ENST00000523847 427 ntTSL 3 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 INO80E-209ENST00000567254 625 ntTSL 2 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AP001462.1-201ENST00000594089 452 ntBASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
KLHDC9Q8NEP7 AC011477.7-201ENST00000617163 1440 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 AC245140.2-201ENST00000624054 1939 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 AC024075.2-201ENST00000598112 1473 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 AL121753.2-201ENST00000624581 1461 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 MIR611-201ENST00000384869 67 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 AC000077.1-201ENST00000420012 953 ntBASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC15.17■□□□□ 0.02
KLHDC9Q8NEP7 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms