Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CMC4P56277 AL591122.2-201ENST00000624125 1853 ntBASIC10.49□□□□□ -0.73
CMC4P56277 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CMC4P56277 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 GOLGA8IP-202ENST00000611635 2100 ntBASIC10.48□□□□□ -0.73
CMC4P56277 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CMC4P56277 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CMC4P56277 MIR557-201ENST00000385239 98 ntBASIC10.48□□□□□ -0.73
CMC4P56277 MIR1307-201ENST00000408840 149 ntBASIC10.48□□□□□ -0.73
CMC4P56277 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 GRPEL2P1-201ENST00000453145 339 ntBASIC10.48□□□□□ -0.73
CMC4P56277 TSACC-208ENST00000481479 741 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 IGLV3-15-201ENST00000518356 244 ntBASIC10.48□□□□□ -0.73
CMC4P56277 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 AL031713.1-201ENST00000564813 661 ntBASIC10.48□□□□□ -0.73
CMC4P56277 RN7SL455P-201ENST00000580629 282 ntBASIC10.48□□□□□ -0.73
CMC4P56277 AP005264.5-201ENST00000590066 467 ntBASIC10.48□□□□□ -0.73
CMC4P56277 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.48□□□□□ -0.73
CMC4P56277 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 AC051619.9-201ENST00000623237 597 ntBASIC10.48□□□□□ -0.73
CMC4P56277 PPA1-206ENST00000625364 644 ntTSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 GOLGA8EP-201ENST00000530246 1959 ntBASIC10.48□□□□□ -0.73
CMC4P56277 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
CMC4P56277 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CMC4P56277 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CMC4P56277 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.48□□□□□ -0.73
CMC4P56277 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CMC4P56277 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.47□□□□□ -0.73
CMC4P56277 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
CMC4P56277 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
CMC4P56277 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
CMC4P56277 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CMC4P56277 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
CMC4P56277 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC10.47□□□□□ -0.73
CMC4P56277 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CMC4P56277 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC10.47□□□□□ -0.73
CMC4P56277 HLA-DQB2-229ENST00000411527 1059 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms