Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.96□□□□□ -0.33
NKX2-2O95096 AC020922.3-201ENST00000595064 547 ntBASIC12.96□□□□□ -0.33
NKX2-2O95096 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-2O95096 AL356740.1-201ENST00000602192 1297 ntBASIC12.96□□□□□ -0.33
NKX2-2O95096 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 MIR6787-201ENST00000616675 61 ntBASIC12.96□□□□□ -0.33
NKX2-2O95096 AP001505.2-201ENST00000616815 443 ntBASIC12.96□□□□□ -0.33
NKX2-2O95096 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.96□□□□□ -0.33
NKX2-2O95096 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NKX2-2O95096 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
NKX2-2O95096 Z98885.3-201ENST00000624882 1757 ntBASIC12.96□□□□□ -0.34
NKX2-2O95096 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-2O95096 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-2O95096 AF013593.1-201ENST00000458074 1487 ntBASIC12.96□□□□□ -0.34
NKX2-2O95096 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-2O95096 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.96□□□□□ -0.34
NKX2-2O95096 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-2O95096 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-2O95096 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.34
NKX2-2O95096 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NKX2-2O95096 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.96□□□□□ -0.34
NKX2-2O95096 AC092053.3-201ENST00000641308 4975 ntBASIC12.96□□□□□ -0.34
NKX2-2O95096 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-2O95096 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-2O95096 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
NKX2-2O95096 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.95□□□□□ -0.34
NKX2-2O95096 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NKX2-2O95096 MIR3619-201ENST00000579667 83 ntBASIC12.95□□□□□ -0.34
NKX2-2O95096 AC103810.3-201ENST00000583567 96 ntBASIC12.95□□□□□ -0.34
NKX2-2O95096 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC12.95□□□□□ -0.34
NKX2-2O95096 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NKX2-2O95096 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.95□□□□□ -0.34
NKX2-2O95096 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NKX2-2O95096 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.95□□□□□ -0.34
NKX2-2O95096 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC12.94□□□□□ -0.34
NKX2-2O95096 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.94□□□□□ -0.34
NKX2-2O95096 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NKX2-2O95096 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.94□□□□□ -0.34
NKX2-2O95096 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.94□□□□□ -0.34
NKX2-2O95096 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.94□□□□□ -0.34
NKX2-2O95096 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 AC098934.1-203ENST00000442868 1262 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 AC007279.1-201ENST00000448547 837 ntBASIC12.94□□□□□ -0.34
NKX2-2O95096 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NKX2-2O95096 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms