Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 TMEM161B-207ENST00000509387 963 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC009054.2-201ENST00000561956 374 ntTSL 3 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC079414.3-201ENST00000612986 1090 ntBASIC8.33□□□□□ -1.08
SVIPQ8NHG7 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC002044.3-201ENST00000623314 541 ntBASIC8.33□□□□□ -1.08
SVIPQ8NHG7 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 TDRD3-208ENST00000535286 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AL445250.1-201ENST00000641671 2259 ntBASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AC006330.1-201ENST00000624598 1987 ntBASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 TSPAN14-206ENST00000372164 5476 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 ZNF215-201ENST00000278319 3448 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 OTUD6B-205ENST00000615618 3434 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 HSFY1-204ENST00000382856 1374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 ITGAL-202ENST00000358164 4673 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 CCPG1-201ENST00000310958 6822 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 LINC00298-201ENST00000426969 2236 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 MAPK10-368ENST00000641911 2238 ntAPPRIS P2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 SEMA4G-201ENST00000210633 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 SYS1-204ENST00000426004 2915 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 AL356961.1-201ENST00000567967 1923 ntBASIC8.33□□□□□ -1.08
SVIPQ8NHG7 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
SVIPQ8NHG7 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AL603865.1-201ENST00000403062 1348 ntBASIC8.32□□□□□ -1.08
SVIPQ8NHG7 PALB2-206ENST00000568219 3963 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CAPN2-202ENST00000433674 3264 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CNGB1-204ENST00000564448 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 EYA1-207ENST00000419131 1723 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ZNF615-214ENST00000618049 2284 ntTSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 HSD11B1-202ENST00000367027 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 NPY1R-201ENST00000296533 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 NACAP1-202ENST00000519039 641 ntBASIC8.32□□□□□ -1.08
SVIPQ8NHG7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AC138869.3-201ENST00000563960 2486 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 NECTIN4-201ENST00000368012 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CDK20-204ENST00000375883 2301 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 LINC01588-208ENST00000554129 2301 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 MAPK10-375ENST00000641989 2331 ntBASIC8.32□□□□□ -1.08
SVIPQ8NHG7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 AP006587.1-201ENST00000534129 1502 ntBASIC8.32□□□□□ -1.08
SVIPQ8NHG7 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 GDA-203ENST00000376986 1771 ntTSL 2 BASIC8.32□□□□□ -1.08
SVIPQ8NHG7 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms