RNA–Protein interactions for RNA: ENST00000450979.2

KDM4E-201, Transcript of lysine demethylase 4E, humanhuman

APPRIS P1 BASIC

Gene KDM4E, Length 2,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4E-201ENST00000450979 NISCHQ9Y2I1 1504 aa28.21■■■□□ 2.11
KDM4E-201ENST00000450979 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
KDM4E-201ENST00000450979 ZCCHC6Q5VYS8 1495 aaKnown RBP23.65■■□□□ 1.38
KDM4E-201ENST00000450979 ABCC9O60706 1549 aa23.65■■□□□ 1.38
KDM4E-201ENST00000450979 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
KDM4E-201ENST00000450979 SHROOM4Q9ULL8 1493 aa23.2■■□□□ 1.31
KDM4E-201ENST00000450979 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
KDM4E-201ENST00000450979 NACADO15069 1562 aa22.91■■□□□ 1.26
KDM4E-201ENST00000450979 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
KDM4E-201ENST00000450979 SCRIBQ14160 1630 aa22.8■■□□□ 1.24
KDM4E-201ENST00000450979 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
KDM4E-201ENST00000450979 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
KDM4E-201ENST00000450979 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
KDM4E-201ENST00000450979 BICRAQ9NZM4 1560 aa22.24■■□□□ 1.15
KDM4E-201ENST00000450979 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
KDM4E-201ENST00000450979 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
KDM4E-201ENST00000450979 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
KDM4E-201ENST00000450979 RSF1Q96T23 1441 aaPredicted RBP21.88■■□□□ 1.09
KDM4E-201ENST00000450979 BAZ1AQ9NRL2 1556 aaPredicted RBP21.74■■□□□ 1.07
KDM4E-201ENST00000450979 SMARCA4P51532 1647 aa21.73■■□□□ 1.07
KDM4E-201ENST00000450979 WIZO95785 1651 aa21.72■■□□□ 1.07
KDM4E-201ENST00000450979 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
KDM4E-201ENST00000450979 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
KDM4E-201ENST00000450979 PEG3Q9GZU2 1588 aa21.37■■□□□ 1.01
KDM4E-201ENST00000450979 TOP2AP11388 1531 aaKnown RBP21.35■■□□□ 1.01
KDM4E-201ENST00000450979 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
KDM4E-201ENST00000450979 SMARCA2P51531 1590 aa21.31■■□□□ 1
KDM4E-201ENST00000450979 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
KDM4E-201ENST00000450979 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
KDM4E-201ENST00000450979 NCAPD3P42695 1498 aa21.19■□□□□ 0.98
KDM4E-201ENST00000450979 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
KDM4E-201ENST00000450979 HMGXB3Q12766 1538 aa21.12■□□□□ 0.97
KDM4E-201ENST00000450979 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
KDM4E-201ENST00000450979 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
KDM4E-201ENST00000450979 NESP48681 1621 aa20.74■□□□□ 0.91
KDM4E-201ENST00000450979 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
KDM4E-201ENST00000450979 CFTRP13569 1480 aa20.72■□□□□ 0.91
KDM4E-201ENST00000450979 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
KDM4E-201ENST00000450979 WRNQ14191 1432 aaPredicted RBP eCLIP20.57■□□□□ 0.88
KDM4E-201ENST00000450979 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
KDM4E-201ENST00000450979 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
KDM4E-201ENST00000450979 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
KDM4E-201ENST00000450979 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
KDM4E-201ENST00000450979 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
KDM4E-201ENST00000450979 CUX1P39880 1505 aa20.45■□□□□ 0.86
KDM4E-201ENST00000450979 EHMT2Q96KQ7 1210 aa20.42■□□□□ 0.86
KDM4E-201ENST00000450979 KIF21AQ7Z4S6 1674 aa20.4■□□□□ 0.86
KDM4E-201ENST00000450979 LOC105371045A0A1W2PR82 267 aa20.39■□□□□ 0.85
KDM4E-201ENST00000450979 SOGA1O94964 1423 aa20.39■□□□□ 0.85
KDM4E-201ENST00000450979 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
KDM4E-201ENST00000450979 RUSC2Q8N2Y8 1516 aa20.37■□□□□ 0.85
KDM4E-201ENST00000450979 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
KDM4E-201ENST00000450979 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
KDM4E-201ENST00000450979 BIVM-ERCC5R4GMW8 1640 aa20.34■□□□□ 0.85
KDM4E-201ENST00000450979 URB2Q14146 1524 aaKnown RBP20.29■□□□□ 0.84
KDM4E-201ENST00000450979 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
KDM4E-201ENST00000450979 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
KDM4E-201ENST00000450979 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
KDM4E-201ENST00000450979 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
KDM4E-201ENST00000450979 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
KDM4E-201ENST00000450979 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
KDM4E-201ENST00000450979 MRC2Q9UBG0 1479 aa20.13■□□□□ 0.81
KDM4E-201ENST00000450979 CSRNP3Q8WYN3 585 aa20.11■□□□□ 0.81
KDM4E-201ENST00000450979 CUX2O14529 1486 aa20.09■□□□□ 0.81
KDM4E-201ENST00000450979 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
KDM4E-201ENST00000450979 WDR62O43379 1518 aa20.02■□□□□ 0.8
KDM4E-201ENST00000450979 EEA1Q15075 1411 aa20.02■□□□□ 0.8
KDM4E-201ENST00000450979 KIF27Q86VH2 1401 aa20.02■□□□□ 0.8
KDM4E-201ENST00000450979 TDRD9Q8NDG6 1382 aaKnown RBP20■□□□□ 0.79
KDM4E-201ENST00000450979 ABCA10Q8WWZ4 1543 aa19.98■□□□□ 0.79
KDM4E-201ENST00000450979 TARBP1Q13395 1621 aaKnown RBP19.96■□□□□ 0.79
KDM4E-201ENST00000450979 RAPGEF2Q9Y4G8 1499 aa19.95■□□□□ 0.78
KDM4E-201ENST00000450979 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
KDM4E-201ENST00000450979 IGF1RP08069 1367 aa19.93■□□□□ 0.78
KDM4E-201ENST00000450979 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
KDM4E-201ENST00000450979 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
KDM4E-201ENST00000450979 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.78
KDM4E-201ENST00000450979 GOLGA3Q08378 1498 aa19.87■□□□□ 0.77
KDM4E-201ENST00000450979 PRXQ9BXM0 1461 aa19.87■□□□□ 0.77
KDM4E-201ENST00000450979 KIF21BO75037 1637 aa19.86■□□□□ 0.77
KDM4E-201ENST00000450979 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
KDM4E-201ENST00000450979 RANGAP1P46060 587 aaPredicted RBP19.85■□□□□ 0.77
KDM4E-201ENST00000450979 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
KDM4E-201ENST00000450979 IFT140Q96RY7 1462 aa19.83■□□□□ 0.76
KDM4E-201ENST00000450979 CARMIL1Q5VZK9 1371 aa19.81■□□□□ 0.76
KDM4E-201ENST00000450979 TNIKQ9UKE5 1360 aa19.76■□□□□ 0.75
KDM4E-201ENST00000450979 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
KDM4E-201ENST00000450979 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
KDM4E-201ENST00000450979 CEP162Q5TB80 1403 aa19.73■□□□□ 0.75
KDM4E-201ENST00000450979 ERICH3Q5RHP9 1530 aa19.73■□□□□ 0.75
KDM4E-201ENST00000450979 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
KDM4E-201ENST00000450979 CUL7Q14999 1698 aa19.67■□□□□ 0.74
KDM4E-201ENST00000450979 SNAPC4Q5SXM2 1469 aa19.65■□□□□ 0.74
KDM4E-201ENST00000450979 ADAMTS12P58397 1594 aa19.62■□□□□ 0.73
KDM4E-201ENST00000450979 CLIP1P30622 1438 aa19.6■□□□□ 0.73
KDM4E-201ENST00000450979 FBLN2P98095 1184 aa19.58■□□□□ 0.73
KDM4E-201ENST00000450979 FHAD1B1AJZ9 1412 aa19.58■□□□□ 0.72
KDM4E-201ENST00000450979 PPARGC1BQ86YN6 1023 aaKnown RBP19.56■□□□□ 0.72
KDM4E-201ENST00000450979 P3H3Q8IVL6 736 aa19.52■□□□□ 0.71
KDM4E-201ENST00000450979 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms