RNA–Protein interactions for RNA: ENST00000426969.5

LINC00298-201, long intergenic non-protein coding RNA 298, humanhuman

TSL 1 (best) BASIC

Gene LINC00298, Length 2,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00298-201ENST00000426969 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
LINC00298-201ENST00000426969 HRCP23327 699 aa16.78■□□□□ 0.28
LINC00298-201ENST00000426969 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
LINC00298-201ENST00000426969 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.19
LINC00298-201ENST00000426969 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
LINC00298-201ENST00000426969 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
LINC00298-201ENST00000426969 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
LINC00298-201ENST00000426969 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
LINC00298-201ENST00000426969 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
LINC00298-201ENST00000426969 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
LINC00298-201ENST00000426969 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
LINC00298-201ENST00000426969 CCDC180Q9P1Z9 1646 aa16.07■□□□□ 0.16
LINC00298-201ENST00000426969 MYT1Q01538 1121 aa15.98■□□□□ 0.15
LINC00298-201ENST00000426969 ZEB1P37275 1124 aaPredicted RBP15.95■□□□□ 0.14
LINC00298-201ENST00000426969 TRIM26Q12899 539 aaPredicted RBP15.92■□□□□ 0.14
LINC00298-201ENST00000426969 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
LINC00298-201ENST00000426969 LOC105371045A0A1W2PR82 267 aa15.6■□□□□ 0.09
LINC00298-201ENST00000426969 ACIN1Q9UKV3 1341 aaKnown RBP15.49■□□□□ 0.07
LINC00298-201ENST00000426969 CENPBP07199 599 aaPredicted RBP15.36■□□□□ 0.05
LINC00298-201ENST00000426969 NEUROD1Q13562 356 aa15.32■□□□□ 0.04
LINC00298-201ENST00000426969 ABCC9O60706 1549 aa15.32■□□□□ 0.04
LINC00298-201ENST00000426969 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
LINC00298-201ENST00000426969 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
LINC00298-201ENST00000426969 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
LINC00298-201ENST00000426969 DCAF8L2P0C7V8 631 aa15.13■□□□□ 0.01
LINC00298-201ENST00000426969 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
LINC00298-201ENST00000426969 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
LINC00298-201ENST00000426969 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
LINC00298-201ENST00000426969 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
LINC00298-201ENST00000426969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
LINC00298-201ENST00000426969 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
LINC00298-201ENST00000426969 CLSPNQ9HAW4 1339 aa14.93□□□□□ -0.02
LINC00298-201ENST00000426969 ZNF316A6NFI3 1004 aaPredicted RBP14.92□□□□□ -0.02
LINC00298-201ENST00000426969 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
LINC00298-201ENST00000426969 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
LINC00298-201ENST00000426969 EIF4G1Q04637 1599 aaKnown RBP14.76□□□□□ -0.05
LINC00298-201ENST00000426969 MIER1Q8N108 512 aa14.69□□□□□ -0.06
LINC00298-201ENST00000426969 YTHDC1Q96MU7 727 aaKnown RBP14.68□□□□□ -0.06
LINC00298-201ENST00000426969 CEP162Q5TB80 1403 aa14.68□□□□□ -0.06
LINC00298-201ENST00000426969 TNIKQ9UKE5 1360 aa14.67□□□□□ -0.06
LINC00298-201ENST00000426969 ANP32EQ9BTT0 268 aa14.65□□□□□ -0.06
LINC00298-201ENST00000426969 BAZ1AQ9NRL2 1556 aaPredicted RBP14.64□□□□□ -0.07
LINC00298-201ENST00000426969 EHMT2Q96KQ7 1210 aa14.64□□□□□ -0.07
LINC00298-201ENST00000426969 EEA1Q15075 1411 aa14.63□□□□□ -0.07
LINC00298-201ENST00000426969 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
LINC00298-201ENST00000426969 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
LINC00298-201ENST00000426969 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.08
LINC00298-201ENST00000426969 WIZO95785 1651 aa14.57□□□□□ -0.08
LINC00298-201ENST00000426969 BCL11AQ9H165 835 aa14.56□□□□□ -0.08
LINC00298-201ENST00000426969 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
LINC00298-201ENST00000426969 TSHZ2Q9NRE2 1034 aa14.52□□□□□ -0.08
LINC00298-201ENST00000426969 GOLGA3Q08378 1498 aa14.47□□□□□ -0.09
LINC00298-201ENST00000426969 NACADO15069 1562 aa14.47□□□□□ -0.09
LINC00298-201ENST00000426969 CCDC88BA6NC98 1476 aa14.47□□□□□ -0.09
LINC00298-201ENST00000426969 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
LINC00298-201ENST00000426969 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
LINC00298-201ENST00000426969 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
LINC00298-201ENST00000426969 KIF21BO75037 1637 aa14.39□□□□□ -0.11
LINC00298-201ENST00000426969 SOGA1O94964 1423 aa14.38□□□□□ -0.11
LINC00298-201ENST00000426969 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
LINC00298-201ENST00000426969 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
LINC00298-201ENST00000426969 CEP164Q9UPV0 1460 aa14.34□□□□□ -0.11
LINC00298-201ENST00000426969 BAZ1BQ9UIG0 1483 aaKnown RBP14.32□□□□□ -0.12
LINC00298-201ENST00000426969 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
LINC00298-201ENST00000426969 HNRNPUL2Q1KMD3 747 aaKnown RBP14.31□□□□□ -0.12
LINC00298-201ENST00000426969 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
LINC00298-201ENST00000426969 CLIP1P30622 1438 aa14.27□□□□□ -0.12
LINC00298-201ENST00000426969 RUSC2Q8N2Y8 1516 aa14.26□□□□□ -0.13
LINC00298-201ENST00000426969 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
LINC00298-201ENST00000426969 CUX2O14529 1486 aa14.23□□□□□ -0.13
LINC00298-201ENST00000426969 APLP2Q06481 763 aa14.21□□□□□ -0.13
LINC00298-201ENST00000426969 RBM19Q9Y4C8 960 aaKnown RBP14.18□□□□□ -0.14
LINC00298-201ENST00000426969 MYT1LQ9UL68 1186 aa14.17□□□□□ -0.14
LINC00298-201ENST00000426969 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
LINC00298-201ENST00000426969 NEFLP07196 543 aa14.12□□□□□ -0.15
LINC00298-201ENST00000426969 FKBP8Q14318 412 aa14.11□□□□□ -0.15
LINC00298-201ENST00000426969 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
LINC00298-201ENST00000426969 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
LINC00298-201ENST00000426969 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
LINC00298-201ENST00000426969 CCER2I3L3R5 266 aa14.05□□□□□ -0.16
LINC00298-201ENST00000426969 RAPGEF2Q9Y4G8 1499 aa14.04□□□□□ -0.16
LINC00298-201ENST00000426969 BCANQ96GW7 911 aa14.03□□□□□ -0.16
LINC00298-201ENST00000426969 PEG3Q9GZU2 1588 aa14.02□□□□□ -0.17
LINC00298-201ENST00000426969 MSH5O43196 834 aa13.99□□□□□ -0.17
LINC00298-201ENST00000426969 TIMELESSQ9UNS1 1208 aa13.99□□□□□ -0.17
LINC00298-201ENST00000426969 MAPKBP1O60336 1514 aa13.99□□□□□ -0.17
LINC00298-201ENST00000426969 KCNH8Q96L42 1107 aa13.99□□□□□ -0.17
LINC00298-201ENST00000426969 ARAP1Q96P48 1450 aa13.98□□□□□ -0.17
LINC00298-201ENST00000426969 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
LINC00298-201ENST00000426969 ERICH6BQ5W0A0 696 aa13.96□□□□□ -0.17
LINC00298-201ENST00000426969 PPP1R15AO75807 674 aaPredicted RBP13.95□□□□□ -0.18
LINC00298-201ENST00000426969 PRKCSHP14314 528 aaPredicted RBP13.95□□□□□ -0.18
LINC00298-201ENST00000426969 ERICH6Q7L0X2 663 aa13.95□□□□□ -0.18
LINC00298-201ENST00000426969 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
LINC00298-201ENST00000426969 PRXQ9BXM0 1461 aa13.92□□□□□ -0.18
LINC00298-201ENST00000426969 CDK11AQ9UQ88 783 aaPredicted RBP13.91□□□□□ -0.18
LINC00298-201ENST00000426969 MAP3K1Q13233 1512 aa13.91□□□□□ -0.18
LINC00298-201ENST00000426969 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
LINC00298-201ENST00000426969 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
LINC00298-201ENST00000426969 UNC13AQ9UPW8 1703 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms