RNA–Protein interactions for RNA: ENST00000426004.5

SYS1-204, Transcript of SYS1, golgi trafficking protein, humanhuman

TSL 2 BASIC

Gene SYS1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYS1-204ENST00000426004 NISCHQ9Y2I1 1504 aa22.33■■□□□ 1.16
SYS1-204ENST00000426004 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
SYS1-204ENST00000426004 DCAF8L2P0C7V8 631 aa19.16■□□□□ 0.66
SYS1-204ENST00000426004 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
SYS1-204ENST00000426004 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
SYS1-204ENST00000426004 ZCCHC6Q5VYS8 1495 aaKnown RBP18.79■□□□□ 0.6
SYS1-204ENST00000426004 ABCC9O60706 1549 aa18.19■□□□□ 0.5
SYS1-204ENST00000426004 DCAF1Q9Y4B6 1507 aa18.13■□□□□ 0.49
SYS1-204ENST00000426004 SCRIBQ14160 1630 aa18.03■□□□□ 0.48
SYS1-204ENST00000426004 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
SYS1-204ENST00000426004 MYO15BQ96JP2 1530 aa17.9■□□□□ 0.46
SYS1-204ENST00000426004 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
SYS1-204ENST00000426004 RSF1Q96T23 1441 aaPredicted RBP17.68■□□□□ 0.42
SYS1-204ENST00000426004 CECR2Q9BXF3 1484 aa17.65■□□□□ 0.42
SYS1-204ENST00000426004 EHMT2Q96KQ7 1210 aa17.59■□□□□ 0.41
SYS1-204ENST00000426004 NACADO15069 1562 aa17.57■□□□□ 0.4
SYS1-204ENST00000426004 FAM9AQ8IZU1 332 aaPredicted RBP17.51■□□□□ 0.39
SYS1-204ENST00000426004 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
SYS1-204ENST00000426004 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
SYS1-204ENST00000426004 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
SYS1-204ENST00000426004 TRIM41Q8WV44 630 aa17.41■□□□□ 0.38
SYS1-204ENST00000426004 WIZO95785 1651 aa17.37■□□□□ 0.37
SYS1-204ENST00000426004 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
SYS1-204ENST00000426004 HRCP23327 699 aa17.35■□□□□ 0.37
SYS1-204ENST00000426004 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
SYS1-204ENST00000426004 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
SYS1-204ENST00000426004 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
SYS1-204ENST00000426004 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
SYS1-204ENST00000426004 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
SYS1-204ENST00000426004 TRIM26Q12899 539 aaPredicted RBP17.01■□□□□ 0.31
SYS1-204ENST00000426004 CCDC88BA6NC98 1476 aa17■□□□□ 0.31
SYS1-204ENST00000426004 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
SYS1-204ENST00000426004 TOP2AP11388 1531 aaKnown RBP16.91■□□□□ 0.3
SYS1-204ENST00000426004 TTBK1Q5TCY1 1321 aaPredicted RBP16.9■□□□□ 0.3
SYS1-204ENST00000426004 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
SYS1-204ENST00000426004 EIF4G1Q04637 1599 aaKnown RBP16.88■□□□□ 0.29
SYS1-204ENST00000426004 SOGA1O94964 1423 aa16.8■□□□□ 0.28
SYS1-204ENST00000426004 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.27
SYS1-204ENST00000426004 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
SYS1-204ENST00000426004 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
SYS1-204ENST00000426004 BAZ1BQ9UIG0 1483 aaKnown RBP16.68■□□□□ 0.26
SYS1-204ENST00000426004 UBTFP17480 764 aaKnown RBP16.68■□□□□ 0.26
SYS1-204ENST00000426004 ZEB1P37275 1124 aaPredicted RBP16.65■□□□□ 0.26
SYS1-204ENST00000426004 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
SYS1-204ENST00000426004 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
SYS1-204ENST00000426004 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
SYS1-204ENST00000426004 SYNJ1O43426 1573 aa16.54■□□□□ 0.24
SYS1-204ENST00000426004 CEP162Q5TB80 1403 aa16.5■□□□□ 0.23
SYS1-204ENST00000426004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
SYS1-204ENST00000426004 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SYS1-204ENST00000426004 TNIKQ9UKE5 1360 aa16.41■□□□□ 0.22
SYS1-204ENST00000426004 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
SYS1-204ENST00000426004 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
SYS1-204ENST00000426004 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
SYS1-204ENST00000426004 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
SYS1-204ENST00000426004 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
SYS1-204ENST00000426004 KIF21BO75037 1637 aa16.25■□□□□ 0.19
SYS1-204ENST00000426004 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
SYS1-204ENST00000426004 CUX1P39880 1505 aa16.24■□□□□ 0.19
SYS1-204ENST00000426004 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
SYS1-204ENST00000426004 CLIP1P30622 1438 aa16.24■□□□□ 0.19
SYS1-204ENST00000426004 HMGXB3Q12766 1538 aa16.24■□□□□ 0.19
SYS1-204ENST00000426004 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
SYS1-204ENST00000426004 CFTRP13569 1480 aa16.19■□□□□ 0.18
SYS1-204ENST00000426004 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
SYS1-204ENST00000426004 NESP48681 1621 aa16.13■□□□□ 0.17
SYS1-204ENST00000426004 APLP2Q06481 763 aa16.13■□□□□ 0.17
SYS1-204ENST00000426004 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
SYS1-204ENST00000426004 BIVM-ERCC5R4GMW8 1640 aa16.1■□□□□ 0.17
SYS1-204ENST00000426004 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
SYS1-204ENST00000426004 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
SYS1-204ENST00000426004 VPS8Q8N3P4 1428 aa16.08■□□□□ 0.16
SYS1-204ENST00000426004 CUX2O14529 1486 aa16.07■□□□□ 0.16
SYS1-204ENST00000426004 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
SYS1-204ENST00000426004 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
SYS1-204ENST00000426004 PRXQ9BXM0 1461 aa16.05■□□□□ 0.16
SYS1-204ENST00000426004 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
SYS1-204ENST00000426004 ITGAEP38570 1179 aa16.01■□□□□ 0.15
SYS1-204ENST00000426004 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
SYS1-204ENST00000426004 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
SYS1-204ENST00000426004 ARAP1Q96P48 1450 aa16■□□□□ 0.15
SYS1-204ENST00000426004 IGF1RP08069 1367 aa16■□□□□ 0.15
SYS1-204ENST00000426004 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
SYS1-204ENST00000426004 ERICH3Q5RHP9 1530 aa15.98■□□□□ 0.15
SYS1-204ENST00000426004 DIEXFQ68CQ4 756 aaKnown RBP15.96■□□□□ 0.15
SYS1-204ENST00000426004 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
SYS1-204ENST00000426004 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
SYS1-204ENST00000426004 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
SYS1-204ENST00000426004 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
SYS1-204ENST00000426004 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
SYS1-204ENST00000426004 ZNF316A6NFI3 1004 aaPredicted RBP15.85■□□□□ 0.13
SYS1-204ENST00000426004 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
SYS1-204ENST00000426004 ACIN1Q9UKV3 1341 aaKnown RBP15.84■□□□□ 0.13
SYS1-204ENST00000426004 TOPBP1Q92547 1522 aa15.83■□□□□ 0.13
SYS1-204ENST00000426004 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
SYS1-204ENST00000426004 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
SYS1-204ENST00000426004 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
SYS1-204ENST00000426004 ARID3CA6NKF2 412 aa15.75■□□□□ 0.11
SYS1-204ENST00000426004 CENPBP07199 599 aaPredicted RBP15.75■□□□□ 0.11
SYS1-204ENST00000426004 DNMBPQ6XZF7 1577 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms