RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 NISCHQ9Y2I1 1504 aa21.71■■□□□ 1.07
SOCS6-201ENST00000397942 DCAF8L2P0C7V8 631 aa21.67■■□□□ 1.06
SOCS6-201ENST00000397942 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
SOCS6-201ENST00000397942 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
SOCS6-201ENST00000397942 EHMT2Q96KQ7 1210 aa20.02■□□□□ 0.8
SOCS6-201ENST00000397942 PCGF6Q9BYE7 350 aa19.82■□□□□ 0.76
SOCS6-201ENST00000397942 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
SOCS6-201ENST00000397942 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
SOCS6-201ENST00000397942 APLP2Q06481 763 aa19.35■□□□□ 0.69
SOCS6-201ENST00000397942 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
SOCS6-201ENST00000397942 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
SOCS6-201ENST00000397942 ZEB1P37275 1124 aaPredicted RBP19.16■□□□□ 0.66
SOCS6-201ENST00000397942 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
SOCS6-201ENST00000397942 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
SOCS6-201ENST00000397942 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
SOCS6-201ENST00000397942 HRCP23327 699 aa19.04■□□□□ 0.64
SOCS6-201ENST00000397942 UBTFP17480 764 aaKnown RBP19.02■□□□□ 0.64
SOCS6-201ENST00000397942 PPARGC1BQ86YN6 1023 aaKnown RBP18.99■□□□□ 0.63
SOCS6-201ENST00000397942 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
SOCS6-201ENST00000397942 PELP1Q8IZL8 1130 aaKnown RBP18.96■□□□□ 0.63
SOCS6-201ENST00000397942 CENPBP07199 599 aaPredicted RBP18.9■□□□□ 0.62
SOCS6-201ENST00000397942 ATP1B4Q9UN42 357 aaPredicted RBP18.67■□□□□ 0.58
SOCS6-201ENST00000397942 YTHDC1Q96MU7 727 aaKnown RBP18.58■□□□□ 0.57
SOCS6-201ENST00000397942 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
SOCS6-201ENST00000397942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.45■□□□□ 0.54
SOCS6-201ENST00000397942 ITGAEP38570 1179 aa18.37■□□□□ 0.53
SOCS6-201ENST00000397942 NEFLP07196 543 aa18.25■□□□□ 0.51
SOCS6-201ENST00000397942 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
SOCS6-201ENST00000397942 ABCC9O60706 1549 aa18.23■□□□□ 0.51
SOCS6-201ENST00000397942 PABPN1Q86U42 306 aaKnown RBP eCLIP18.18■□□□□ 0.5
SOCS6-201ENST00000397942 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
SOCS6-201ENST00000397942 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.48
SOCS6-201ENST00000397942 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
SOCS6-201ENST00000397942 MYT1Q01538 1121 aa17.95■□□□□ 0.46
SOCS6-201ENST00000397942 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
SOCS6-201ENST00000397942 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
SOCS6-201ENST00000397942 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
SOCS6-201ENST00000397942 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
SOCS6-201ENST00000397942 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
SOCS6-201ENST00000397942 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
SOCS6-201ENST00000397942 NEUROD1Q13562 356 aa17.79■□□□□ 0.44
SOCS6-201ENST00000397942 ACIN1Q9UKV3 1341 aaKnown RBP17.75■□□□□ 0.43
SOCS6-201ENST00000397942 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
SOCS6-201ENST00000397942 TRIM52Q96A61 297 aa17.66■□□□□ 0.42
SOCS6-201ENST00000397942 SCRIBQ14160 1630 aa17.64■□□□□ 0.41
SOCS6-201ENST00000397942 P3H3Q8IVL6 736 aa17.64■□□□□ 0.41
SOCS6-201ENST00000397942 MYT1LQ9UL68 1186 aa17.6■□□□□ 0.41
SOCS6-201ENST00000397942 BCANQ96GW7 911 aa17.59■□□□□ 0.41
SOCS6-201ENST00000397942 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
SOCS6-201ENST00000397942 ANP32CO43423 234 aa17.55■□□□□ 0.4
SOCS6-201ENST00000397942 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
SOCS6-201ENST00000397942 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
SOCS6-201ENST00000397942 DAXXQ9UER7 740 aaPredicted RBP17.43■□□□□ 0.38
SOCS6-201ENST00000397942 ARID3CA6NKF2 412 aa17.42■□□□□ 0.38
SOCS6-201ENST00000397942 SCAF1Q9H7N4 1312 aaKnown RBP17.38■□□□□ 0.37
SOCS6-201ENST00000397942 FBLN2P98095 1184 aa17.38■□□□□ 0.37
SOCS6-201ENST00000397942 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
SOCS6-201ENST00000397942 MIER1Q8N108 512 aa17.35■□□□□ 0.37
SOCS6-201ENST00000397942 CLIP1P30622 1438 aa17.31■□□□□ 0.36
SOCS6-201ENST00000397942 SLC4A1APQ9BWU0 796 aaKnown RBP17.29■□□□□ 0.36
SOCS6-201ENST00000397942 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
SOCS6-201ENST00000397942 CEP162Q5TB80 1403 aa17.27■□□□□ 0.35
SOCS6-201ENST00000397942 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
SOCS6-201ENST00000397942 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
SOCS6-201ENST00000397942 FKBP8Q14318 412 aa17.23■□□□□ 0.35
SOCS6-201ENST00000397942 RTL5Q5HYW3 569 aaPredicted RBP17.23■□□□□ 0.35
SOCS6-201ENST00000397942 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
SOCS6-201ENST00000397942 EEA1Q15075 1411 aa17.22■□□□□ 0.35
SOCS6-201ENST00000397942 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
SOCS6-201ENST00000397942 HNRNPUQ00839 825 aaKnown RBP eCLIP17.19■□□□□ 0.34
SOCS6-201ENST00000397942 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
SOCS6-201ENST00000397942 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
SOCS6-201ENST00000397942 HIRIP3Q9BW71 556 aaPredicted RBP17.17■□□□□ 0.34
SOCS6-201ENST00000397942 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
SOCS6-201ENST00000397942 GOLGA3Q08378 1498 aa17.11■□□□□ 0.33
SOCS6-201ENST00000397942 FAM9BQ8IZU0 186 aa17.09■□□□□ 0.33
SOCS6-201ENST00000397942 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
SOCS6-201ENST00000397942 SOGA1O94964 1423 aa17.01■□□□□ 0.31
SOCS6-201ENST00000397942 RB1CC1Q8TDY2 1594 aa17.01■□□□□ 0.31
SOCS6-201ENST00000397942 NACADO15069 1562 aa17.01■□□□□ 0.31
SOCS6-201ENST00000397942 MRS2Q9HD23 443 aa16.98■□□□□ 0.31
SOCS6-201ENST00000397942 RRP7BPQ9NSQ0 103 aa16.98■□□□□ 0.31
SOCS6-201ENST00000397942 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
SOCS6-201ENST00000397942 SALL2Q9Y467 1007 aaPredicted RBP16.96■□□□□ 0.31
SOCS6-201ENST00000397942 TMC1Q8TDI8 760 aa16.94■□□□□ 0.3
SOCS6-201ENST00000397942 EIF4G2P78344 907 aaKnown RBP eCLIP16.94■□□□□ 0.3
SOCS6-201ENST00000397942 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
SOCS6-201ENST00000397942 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
SOCS6-201ENST00000397942 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
SOCS6-201ENST00000397942 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
SOCS6-201ENST00000397942 KIF27Q86VH2 1401 aa16.92■□□□□ 0.3
SOCS6-201ENST00000397942 ANP32AP39687 249 aaKnown RBP16.92■□□□□ 0.3
SOCS6-201ENST00000397942 IRX6P78412 446 aaPredicted RBP16.9■□□□□ 0.3
SOCS6-201ENST00000397942 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
SOCS6-201ENST00000397942 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
SOCS6-201ENST00000397942 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
SOCS6-201ENST00000397942 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
SOCS6-201ENST00000397942 CCDC136Q96JN2 1154 aa16.87■□□□□ 0.29
SOCS6-201ENST00000397942 CANXP27824 592 aaKnown RBP16.86■□□□□ 0.29
SOCS6-201ENST00000397942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms