RNA–Protein interactions for RNA: ENST00000358164.9

ITGAL-202, Transcript of integrin subunit alpha L, humanhuman

TSL 1 (best) BASIC

Gene ITGAL, Length 4,673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAL-202ENST00000358164 NISCHQ9Y2I1 1504 aa19.02■□□□□ 0.64
ITGAL-202ENST00000358164 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
ITGAL-202ENST00000358164 SUPT5HO00267 1087 aaKnown RBP18.08■□□□□ 0.48
ITGAL-202ENST00000358164 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
ITGAL-202ENST00000358164 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.36
ITGAL-202ENST00000358164 EHMT2Q96KQ7 1210 aa17.26■□□□□ 0.35
ITGAL-202ENST00000358164 APLP2Q06481 763 aa16.98■□□□□ 0.31
ITGAL-202ENST00000358164 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
ITGAL-202ENST00000358164 PELP1Q8IZL8 1130 aaKnown RBP16.91■□□□□ 0.3
ITGAL-202ENST00000358164 ZEB1P37275 1124 aaPredicted RBP16.85■□□□□ 0.29
ITGAL-202ENST00000358164 HRCP23327 699 aa16.73■□□□□ 0.27
ITGAL-202ENST00000358164 TTBK1Q5TCY1 1321 aaPredicted RBP16.73■□□□□ 0.27
ITGAL-202ENST00000358164 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
ITGAL-202ENST00000358164 CENPBP07199 599 aaPredicted RBP16.7■□□□□ 0.26
ITGAL-202ENST00000358164 CCER1Q8TC90 406 aaPredicted RBP16.65■□□□□ 0.26
ITGAL-202ENST00000358164 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
ITGAL-202ENST00000358164 CHIC1Q5VXU3 224 aa16.52■□□□□ 0.24
ITGAL-202ENST00000358164 RANGAP1P46060 587 aaPredicted RBP16.47■□□□□ 0.23
ITGAL-202ENST00000358164 LOC105371045A0A1W2PR82 267 aa16.42■□□□□ 0.22
ITGAL-202ENST00000358164 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
ITGAL-202ENST00000358164 UBTFP17480 764 aaKnown RBP16.37■□□□□ 0.21
ITGAL-202ENST00000358164 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
ITGAL-202ENST00000358164 MYT1Q01538 1121 aa16.32■□□□□ 0.2
ITGAL-202ENST00000358164 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
ITGAL-202ENST00000358164 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
ITGAL-202ENST00000358164 NEFLP07196 543 aa16.07■□□□□ 0.16
ITGAL-202ENST00000358164 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
ITGAL-202ENST00000358164 ABCC9O60706 1549 aa15.97■□□□□ 0.15
ITGAL-202ENST00000358164 DIEXFQ68CQ4 756 aaKnown RBP15.97■□□□□ 0.15
ITGAL-202ENST00000358164 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
ITGAL-202ENST00000358164 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
ITGAL-202ENST00000358164 ITGAEP38570 1179 aa15.82■□□□□ 0.12
ITGAL-202ENST00000358164 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
ITGAL-202ENST00000358164 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
ITGAL-202ENST00000358164 MYT1LQ9UL68 1186 aa15.74■□□□□ 0.11
ITGAL-202ENST00000358164 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
ITGAL-202ENST00000358164 DCAF1Q9Y4B6 1507 aa15.63■□□□□ 0.09
ITGAL-202ENST00000358164 CCDC180Q9P1Z9 1646 aa15.62■□□□□ 0.09
ITGAL-202ENST00000358164 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
ITGAL-202ENST00000358164 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
ITGAL-202ENST00000358164 POLR3GLQ9BT43 218 aa15.49■□□□□ 0.07
ITGAL-202ENST00000358164 DAXXQ9UER7 740 aaPredicted RBP15.48■□□□□ 0.07
ITGAL-202ENST00000358164 BCANQ96GW7 911 aa15.46■□□□□ 0.07
ITGAL-202ENST00000358164 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
ITGAL-202ENST00000358164 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
ITGAL-202ENST00000358164 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
ITGAL-202ENST00000358164 CSRNP3Q8WYN3 585 aa15.42■□□□□ 0.06
ITGAL-202ENST00000358164 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
ITGAL-202ENST00000358164 NEUROD1Q13562 356 aa15.4■□□□□ 0.06
ITGAL-202ENST00000358164 ANP32CO43423 234 aa15.32■□□□□ 0.04
ITGAL-202ENST00000358164 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
ITGAL-202ENST00000358164 SLC4A1APQ9BWU0 796 aaKnown RBP15.29■□□□□ 0.04
ITGAL-202ENST00000358164 TRIM52Q96A61 297 aa15.26■□□□□ 0.03
ITGAL-202ENST00000358164 RSF1Q96T23 1441 aaPredicted RBP15.25■□□□□ 0.03
ITGAL-202ENST00000358164 CDK11AQ9UQ88 783 aaPredicted RBP15.25■□□□□ 0.03
ITGAL-202ENST00000358164 P3H3Q8IVL6 736 aa15.22■□□□□ 0.03
ITGAL-202ENST00000358164 CLSPNQ9HAW4 1339 aa15.21■□□□□ 0.03
ITGAL-202ENST00000358164 MIER1Q8N108 512 aa15.14■□□□□ 0.01
ITGAL-202ENST00000358164 FKBP8Q14318 412 aa15.13■□□□□ 0.01
ITGAL-202ENST00000358164 FBLN2P98095 1184 aa15.11■□□□□ 0.01
ITGAL-202ENST00000358164 ARID3CA6NKF2 412 aa15.08■□□□□ 0
ITGAL-202ENST00000358164 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
ITGAL-202ENST00000358164 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
ITGAL-202ENST00000358164 DDX10Q13206 875 aaKnown RBP15.05■□□□□ -0
ITGAL-202ENST00000358164 ZBTB47Q9UFB7 747 aaPredicted RBP15.01□□□□□ -0.01
ITGAL-202ENST00000358164 NEFMP07197 916 aa14.98□□□□□ -0.01
ITGAL-202ENST00000358164 NACADO15069 1562 aa14.97□□□□□ -0.01
ITGAL-202ENST00000358164 HNRNPUQ00839 825 aaKnown RBP eCLIP14.97□□□□□ -0.01
ITGAL-202ENST00000358164 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
ITGAL-202ENST00000358164 TONSLQ96HA7 1378 aa14.96□□□□□ -0.02
ITGAL-202ENST00000358164 ANP32AP39687 249 aaKnown RBP14.95□□□□□ -0.02
ITGAL-202ENST00000358164 CEP162Q5TB80 1403 aa14.94□□□□□ -0.02
ITGAL-202ENST00000358164 CLIP1P30622 1438 aa14.92□□□□□ -0.02
ITGAL-202ENST00000358164 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
ITGAL-202ENST00000358164 ESF1Q9H501 851 aaKnown RBP14.87□□□□□ -0.03
ITGAL-202ENST00000358164 MROH2BQ7Z745 1585 aa14.86□□□□□ -0.03
ITGAL-202ENST00000358164 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
ITGAL-202ENST00000358164 NPM2Q86SE8 214 aaKnown RBP14.85□□□□□ -0.03
ITGAL-202ENST00000358164 EEA1Q15075 1411 aa14.85□□□□□ -0.03
ITGAL-202ENST00000358164 GOLGA3Q08378 1498 aa14.83□□□□□ -0.04
ITGAL-202ENST00000358164 NPM1P06748 294 aaKnown RBP eCLIP14.83□□□□□ -0.04
ITGAL-202ENST00000358164 HIRIP3Q9BW71 556 aaPredicted RBP14.82□□□□□ -0.04
ITGAL-202ENST00000358164 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
ITGAL-202ENST00000358164 WRNQ14191 1432 aaPredicted RBP eCLIP14.81□□□□□ -0.04
ITGAL-202ENST00000358164 CANXP27824 592 aaKnown RBP14.8□□□□□ -0.04
ITGAL-202ENST00000358164 CHIC2Q9UKJ5 165 aa14.79□□□□□ -0.04
ITGAL-202ENST00000358164 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.04
ITGAL-202ENST00000358164 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
ITGAL-202ENST00000358164 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
ITGAL-202ENST00000358164 ANP32EQ9BTT0 268 aa14.75□□□□□ -0.05
ITGAL-202ENST00000358164 CCDC136Q96JN2 1154 aa14.75□□□□□ -0.05
ITGAL-202ENST00000358164 MRS2Q9HD23 443 aa14.74□□□□□ -0.05
ITGAL-202ENST00000358164 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
ITGAL-202ENST00000358164 NBR1Q14596 966 aa14.72□□□□□ -0.05
ITGAL-202ENST00000358164 BAZ1BQ9UIG0 1483 aaKnown RBP14.72□□□□□ -0.05
ITGAL-202ENST00000358164 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
ITGAL-202ENST00000358164 SUPT16HQ9Y5B9 1047 aaKnown RBP14.71□□□□□ -0.05
ITGAL-202ENST00000358164 SOGA1O94964 1423 aa14.7□□□□□ -0.06
ITGAL-202ENST00000358164 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
ITGAL-202ENST00000358164 SALL2Q9Y467 1007 aaPredicted RBP14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms