RNA–Protein interactions for RNA: ENST00000622421.2

PRAMEF5-201, Transcript of PRAME family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF5, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF5-201ENST00000622421 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
PRAMEF5-201ENST00000622421 CCDC180Q9P1Z9 1646 aa23.96■■□□□ 1.43
PRAMEF5-201ENST00000622421 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.26
PRAMEF5-201ENST00000622421 ABCC9O60706 1549 aa22.87■■□□□ 1.25
PRAMEF5-201ENST00000622421 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
PRAMEF5-201ENST00000622421 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
PRAMEF5-201ENST00000622421 MYO15BQ96JP2 1530 aa22.34■■□□□ 1.17
PRAMEF5-201ENST00000622421 NACADO15069 1562 aa22.32■■□□□ 1.16
PRAMEF5-201ENST00000622421 RB1CC1Q8TDY2 1594 aa22.22■■□□□ 1.15
PRAMEF5-201ENST00000622421 SHROOM4Q9ULL8 1493 aa22.14■■□□□ 1.13
PRAMEF5-201ENST00000622421 SCRIBQ14160 1630 aa22.04■■□□□ 1.12
PRAMEF5-201ENST00000622421 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
PRAMEF5-201ENST00000622421 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
PRAMEF5-201ENST00000622421 PABPN1Q86U42 306 aaKnown RBP eCLIP21.48■■□□□ 1.03
PRAMEF5-201ENST00000622421 CECR2Q9BXF3 1484 aa21.24■□□□□ 0.99
PRAMEF5-201ENST00000622421 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
PRAMEF5-201ENST00000622421 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
PRAMEF5-201ENST00000622421 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
PRAMEF5-201ENST00000622421 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
PRAMEF5-201ENST00000622421 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
PRAMEF5-201ENST00000622421 WIZO95785 1651 aa20.95■□□□□ 0.94
PRAMEF5-201ENST00000622421 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
PRAMEF5-201ENST00000622421 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
PRAMEF5-201ENST00000622421 ATAD2BQ9ULI0 1458 aa20.74■□□□□ 0.91
PRAMEF5-201ENST00000622421 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
PRAMEF5-201ENST00000622421 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
PRAMEF5-201ENST00000622421 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
PRAMEF5-201ENST00000622421 BAZ1BQ9UIG0 1483 aaKnown RBP20.63■□□□□ 0.89
PRAMEF5-201ENST00000622421 HMGXB3Q12766 1538 aa20.57■□□□□ 0.88
PRAMEF5-201ENST00000622421 NCAPD3P42695 1498 aa20.57■□□□□ 0.88
PRAMEF5-201ENST00000622421 CCDC88BA6NC98 1476 aa20.46■□□□□ 0.87
PRAMEF5-201ENST00000622421 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
PRAMEF5-201ENST00000622421 CFTRP13569 1480 aa20.06■□□□□ 0.8
PRAMEF5-201ENST00000622421 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
PRAMEF5-201ENST00000622421 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
PRAMEF5-201ENST00000622421 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
PRAMEF5-201ENST00000622421 NESP48681 1621 aa20.01■□□□□ 0.79
PRAMEF5-201ENST00000622421 ABCC8Q09428 1581 aa20■□□□□ 0.79
PRAMEF5-201ENST00000622421 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
PRAMEF5-201ENST00000622421 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
PRAMEF5-201ENST00000622421 TRIM41Q8WV44 630 aa19.85■□□□□ 0.77
PRAMEF5-201ENST00000622421 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
PRAMEF5-201ENST00000622421 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
PRAMEF5-201ENST00000622421 KIF21AQ7Z4S6 1674 aa19.82■□□□□ 0.76
PRAMEF5-201ENST00000622421 PDS5BQ9NTI5 1447 aa19.77■□□□□ 0.75
PRAMEF5-201ENST00000622421 CEP164Q9UPV0 1460 aa19.76■□□□□ 0.75
PRAMEF5-201ENST00000622421 CUX1P39880 1505 aa19.76■□□□□ 0.75
PRAMEF5-201ENST00000622421 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
PRAMEF5-201ENST00000622421 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
PRAMEF5-201ENST00000622421 DNMBPQ6XZF7 1577 aa19.65■□□□□ 0.74
PRAMEF5-201ENST00000622421 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
PRAMEF5-201ENST00000622421 ERCC6Q03468 1493 aa19.62■□□□□ 0.73
PRAMEF5-201ENST00000622421 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
PRAMEF5-201ENST00000622421 MRC2Q9UBG0 1479 aa19.58■□□□□ 0.72
PRAMEF5-201ENST00000622421 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
PRAMEF5-201ENST00000622421 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
PRAMEF5-201ENST00000622421 SOGA1O94964 1423 aa19.53■□□□□ 0.72
PRAMEF5-201ENST00000622421 FAM9AQ8IZU1 332 aaPredicted RBP19.53■□□□□ 0.72
PRAMEF5-201ENST00000622421 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
PRAMEF5-201ENST00000622421 WDR62O43379 1518 aa19.49■□□□□ 0.71
PRAMEF5-201ENST00000622421 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
PRAMEF5-201ENST00000622421 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
PRAMEF5-201ENST00000622421 WDR97A6NE52 1622 aa19.4■□□□□ 0.7
PRAMEF5-201ENST00000622421 EEA1Q15075 1411 aa19.39■□□□□ 0.69
PRAMEF5-201ENST00000622421 CUX2O14529 1486 aa19.38■□□□□ 0.69
PRAMEF5-201ENST00000622421 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
PRAMEF5-201ENST00000622421 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
PRAMEF5-201ENST00000622421 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
PRAMEF5-201ENST00000622421 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
PRAMEF5-201ENST00000622421 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
PRAMEF5-201ENST00000622421 CSRNP3Q8WYN3 585 aa19.29■□□□□ 0.68
PRAMEF5-201ENST00000622421 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
PRAMEF5-201ENST00000622421 ABCA5Q8WWZ7 1642 aa19.28■□□□□ 0.68
PRAMEF5-201ENST00000622421 TDRD9Q8NDG6 1382 aaKnown RBP19.25■□□□□ 0.67
PRAMEF5-201ENST00000622421 KIF21BO75037 1637 aa19.22■□□□□ 0.67
PRAMEF5-201ENST00000622421 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
PRAMEF5-201ENST00000622421 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
PRAMEF5-201ENST00000622421 GAPVD1Q14C86 1478 aa19.2■□□□□ 0.66
PRAMEF5-201ENST00000622421 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
PRAMEF5-201ENST00000622421 AQRO60306 1485 aaKnown RBP eCLIP19.18■□□□□ 0.66
PRAMEF5-201ENST00000622421 IGF1RP08069 1367 aa19.18■□□□□ 0.66
PRAMEF5-201ENST00000622421 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
PRAMEF5-201ENST00000622421 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
PRAMEF5-201ENST00000622421 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
PRAMEF5-201ENST00000622421 ERICH3Q5RHP9 1530 aa19.14■□□□□ 0.65
PRAMEF5-201ENST00000622421 CUL7Q14999 1698 aa19.13■□□□□ 0.65
PRAMEF5-201ENST00000622421 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
PRAMEF5-201ENST00000622421 GRIN2BQ13224 1484 aa19.08■□□□□ 0.65
PRAMEF5-201ENST00000622421 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
PRAMEF5-201ENST00000622421 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
PRAMEF5-201ENST00000622421 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
PRAMEF5-201ENST00000622421 TNIKQ9UKE5 1360 aa19.01■□□□□ 0.63
PRAMEF5-201ENST00000622421 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
PRAMEF5-201ENST00000622421 MAGI1Q96QZ7 1491 aaPredicted RBP18.95■□□□□ 0.62
PRAMEF5-201ENST00000622421 CEP162Q5TB80 1403 aa18.94■□□□□ 0.62
PRAMEF5-201ENST00000622421 CTTNBP2Q8WZ74 1663 aa18.93■□□□□ 0.62
PRAMEF5-201ENST00000622421 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
PRAMEF5-201ENST00000622421 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
PRAMEF5-201ENST00000622421 HRCP23327 699 aa18.87■□□□□ 0.61
PRAMEF5-201ENST00000622421 GRIN2AQ12879 1464 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms