RNA–Protein interactions for RNA: ENST00000433674.6

CAPN2-202, Transcript of calpain 2, humanhuman

TSL 2 BASIC

Gene CAPN2, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-202ENST00000433674 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
CAPN2-202ENST00000433674 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
CAPN2-202ENST00000433674 DCAF8L2P0C7V8 631 aa18.62■□□□□ 0.57
CAPN2-202ENST00000433674 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
CAPN2-202ENST00000433674 CCDC180Q9P1Z9 1646 aa17.85■□□□□ 0.45
CAPN2-202ENST00000433674 ZCCHC6Q5VYS8 1495 aaKnown RBP17.84■□□□□ 0.45
CAPN2-202ENST00000433674 ABCC9O60706 1549 aa17.46■□□□□ 0.39
CAPN2-202ENST00000433674 SCRIBQ14160 1630 aa17.24■□□□□ 0.35
CAPN2-202ENST00000433674 CHIC1Q5VXU3 224 aa17.23■□□□□ 0.35
CAPN2-202ENST00000433674 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
CAPN2-202ENST00000433674 DCAF1Q9Y4B6 1507 aa17.08■□□□□ 0.33
CAPN2-202ENST00000433674 MYO15BQ96JP2 1530 aa17.07■□□□□ 0.32
CAPN2-202ENST00000433674 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
CAPN2-202ENST00000433674 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
CAPN2-202ENST00000433674 PABPN1Q86U42 306 aaKnown RBP eCLIP16.88■□□□□ 0.29
CAPN2-202ENST00000433674 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
CAPN2-202ENST00000433674 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
CAPN2-202ENST00000433674 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
CAPN2-202ENST00000433674 PCGF6Q9BYE7 350 aa16.77■□□□□ 0.27
CAPN2-202ENST00000433674 NACADO15069 1562 aa16.72■□□□□ 0.27
CAPN2-202ENST00000433674 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
CAPN2-202ENST00000433674 MROH2BQ7Z745 1585 aa16.64■□□□□ 0.25
CAPN2-202ENST00000433674 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
CAPN2-202ENST00000433674 WIZO95785 1651 aa16.54■□□□□ 0.24
CAPN2-202ENST00000433674 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
CAPN2-202ENST00000433674 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
CAPN2-202ENST00000433674 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
CAPN2-202ENST00000433674 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
CAPN2-202ENST00000433674 HRCP23327 699 aa16.27■□□□□ 0.2
CAPN2-202ENST00000433674 ABCC8Q09428 1581 aa16.23■□□□□ 0.19
CAPN2-202ENST00000433674 CCDC88BA6NC98 1476 aa16.21■□□□□ 0.19
CAPN2-202ENST00000433674 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
CAPN2-202ENST00000433674 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
CAPN2-202ENST00000433674 UBTFP17480 764 aaKnown RBP16.15■□□□□ 0.18
CAPN2-202ENST00000433674 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
CAPN2-202ENST00000433674 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
CAPN2-202ENST00000433674 SOGA1O94964 1423 aa16.06■□□□□ 0.16
CAPN2-202ENST00000433674 SMARCA2P51531 1590 aa16.05■□□□□ 0.16
CAPN2-202ENST00000433674 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
CAPN2-202ENST00000433674 BAZ1BQ9UIG0 1483 aaKnown RBP15.97■□□□□ 0.15
CAPN2-202ENST00000433674 CSRNP3Q8WYN3 585 aa15.95■□□□□ 0.14
CAPN2-202ENST00000433674 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
CAPN2-202ENST00000433674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
CAPN2-202ENST00000433674 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
CAPN2-202ENST00000433674 EIF4G1Q04637 1599 aaKnown RBP15.87■□□□□ 0.13
CAPN2-202ENST00000433674 CCER1Q8TC90 406 aaPredicted RBP15.8■□□□□ 0.12
CAPN2-202ENST00000433674 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
CAPN2-202ENST00000433674 SYNJ1O43426 1573 aa15.74■□□□□ 0.11
CAPN2-202ENST00000433674 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
CAPN2-202ENST00000433674 APLP2Q06481 763 aa15.68■□□□□ 0.1
CAPN2-202ENST00000433674 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
CAPN2-202ENST00000433674 TNIKQ9UKE5 1360 aa15.65■□□□□ 0.1
CAPN2-202ENST00000433674 GOLGA3Q08378 1498 aa15.63■□□□□ 0.09
CAPN2-202ENST00000433674 RAPGEF2Q9Y4G8 1499 aa15.61■□□□□ 0.09
CAPN2-202ENST00000433674 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
CAPN2-202ENST00000433674 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
CAPN2-202ENST00000433674 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
CAPN2-202ENST00000433674 CLIP1P30622 1438 aa15.58■□□□□ 0.08
CAPN2-202ENST00000433674 P3H3Q8IVL6 736 aa15.56■□□□□ 0.08
CAPN2-202ENST00000433674 EEA1Q15075 1411 aa15.56■□□□□ 0.08
CAPN2-202ENST00000433674 ITGAEP38570 1179 aa15.55■□□□□ 0.08
CAPN2-202ENST00000433674 NCAPD3P42695 1498 aa15.55■□□□□ 0.08
CAPN2-202ENST00000433674 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
CAPN2-202ENST00000433674 CUX1P39880 1505 aa15.46■□□□□ 0.07
CAPN2-202ENST00000433674 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
CAPN2-202ENST00000433674 NESP48681 1621 aa15.43■□□□□ 0.06
CAPN2-202ENST00000433674 KANK4Q5T7N3 995 aaPredicted RBP15.42■□□□□ 0.06
CAPN2-202ENST00000433674 HMGXB3Q12766 1538 aa15.42■□□□□ 0.06
CAPN2-202ENST00000433674 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
CAPN2-202ENST00000433674 CUX2O14529 1486 aa15.41■□□□□ 0.06
CAPN2-202ENST00000433674 CADPSQ9ULU8 1353 aa15.41■□□□□ 0.06
CAPN2-202ENST00000433674 CFTRP13569 1480 aa15.41■□□□□ 0.06
CAPN2-202ENST00000433674 KIF27Q86VH2 1401 aa15.4■□□□□ 0.06
CAPN2-202ENST00000433674 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
CAPN2-202ENST00000433674 KIF21BO75037 1637 aa15.33■□□□□ 0.04
CAPN2-202ENST00000433674 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
CAPN2-202ENST00000433674 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
CAPN2-202ENST00000433674 ARID3CA6NKF2 412 aa15.3■□□□□ 0.04
CAPN2-202ENST00000433674 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
CAPN2-202ENST00000433674 IGF1RP08069 1367 aa15.27■□□□□ 0.04
CAPN2-202ENST00000433674 CARMIL1Q5VZK9 1371 aa15.27■□□□□ 0.04
CAPN2-202ENST00000433674 BIVM-ERCC5R4GMW8 1640 aa15.26■□□□□ 0.03
CAPN2-202ENST00000433674 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
CAPN2-202ENST00000433674 TDRD9Q8NDG6 1382 aaKnown RBP15.26■□□□□ 0.03
CAPN2-202ENST00000433674 ARAP1Q96P48 1450 aa15.25■□□□□ 0.03
CAPN2-202ENST00000433674 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
CAPN2-202ENST00000433674 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
CAPN2-202ENST00000433674 YTHDC1Q96MU7 727 aaKnown RBP15.22■□□□□ 0.03
CAPN2-202ENST00000433674 ARHGAP35Q9NRY4 1499 aa15.15■□□□□ 0.02
CAPN2-202ENST00000433674 PELP1Q8IZL8 1130 aaKnown RBP15.13■□□□□ 0.01
CAPN2-202ENST00000433674 FHOD3Q2V2M9 1422 aa15.12■□□□□ 0.01
CAPN2-202ENST00000433674 POLA1P09884 1462 aaPredicted RBP15.12■□□□□ 0.01
CAPN2-202ENST00000433674 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
CAPN2-202ENST00000433674 TOPBP1Q92547 1522 aa15.1■□□□□ 0.01
CAPN2-202ENST00000433674 FBLN2P98095 1184 aa15.09■□□□□ 0.01
CAPN2-202ENST00000433674 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
CAPN2-202ENST00000433674 NEUROD1Q13562 356 aa15.08■□□□□ 0
CAPN2-202ENST00000433674 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
CAPN2-202ENST00000433674 CCNB3Q8WWL7 1395 aa15.02■□□□□ -0
CAPN2-202ENST00000433674 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms