RNA–Protein interactions for RNA: ENST00000635299.1

LINC01427-204, Transcript of long intergenic non-protein coding RNA 1427, humanhuman

TSL 5 BASIC

Gene LINC01427, Length 1,978 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01427-204ENST00000635299 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
LINC01427-204ENST00000635299 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
LINC01427-204ENST00000635299 NISCHQ9Y2I1 1504 aa16.5■□□□□ 0.23
LINC01427-204ENST00000635299 PHF23Q9BUL5 403 aaPredicted RBP16.26■□□□□ 0.19
LINC01427-204ENST00000635299 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
LINC01427-204ENST00000635299 PLPPR3Q6T4P5 718 aa15.15■□□□□ 0.02
LINC01427-204ENST00000635299 SENP3Q9H4L4 574 aaPredicted RBP14.85□□□□□ -0.03
LINC01427-204ENST00000635299 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
LINC01427-204ENST00000635299 MYT1Q01538 1121 aa14.53□□□□□ -0.08
LINC01427-204ENST00000635299 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
LINC01427-204ENST00000635299 ADRA2BP18089 450 aa14.39□□□□□ -0.11
LINC01427-204ENST00000635299 HRCP23327 699 aa14.37□□□□□ -0.11
LINC01427-204ENST00000635299 KCNA4P22459 653 aa14.34□□□□□ -0.11
LINC01427-204ENST00000635299 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
LINC01427-204ENST00000635299 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
LINC01427-204ENST00000635299 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
LINC01427-204ENST00000635299 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
LINC01427-204ENST00000635299 ZCCHC6Q5VYS8 1495 aaKnown RBP14.04□□□□□ -0.16
LINC01427-204ENST00000635299 TTBK1Q5TCY1 1321 aaPredicted RBP14.01□□□□□ -0.17
LINC01427-204ENST00000635299 PCGF6Q9BYE7 350 aa14□□□□□ -0.17
LINC01427-204ENST00000635299 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
LINC01427-204ENST00000635299 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
LINC01427-204ENST00000635299 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
LINC01427-204ENST00000635299 CCDC180Q9P1Z9 1646 aa13.85□□□□□ -0.19
LINC01427-204ENST00000635299 FOXD1Q16676 465 aa13.82□□□□□ -0.2
LINC01427-204ENST00000635299 TRIM26Q12899 539 aaPredicted RBP13.74□□□□□ -0.21
LINC01427-204ENST00000635299 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
LINC01427-204ENST00000635299 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.22
LINC01427-204ENST00000635299 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
LINC01427-204ENST00000635299 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.24
LINC01427-204ENST00000635299 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
LINC01427-204ENST00000635299 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
LINC01427-204ENST00000635299 ABCC9O60706 1549 aa13.32□□□□□ -0.28
LINC01427-204ENST00000635299 PRKCSHP14314 528 aaPredicted RBP13.3□□□□□ -0.28
LINC01427-204ENST00000635299 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
LINC01427-204ENST00000635299 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
LINC01427-204ENST00000635299 ZBTB22O15209 634 aa13.27□□□□□ -0.28
LINC01427-204ENST00000635299 TRIM41Q8WV44 630 aa13.25□□□□□ -0.29
LINC01427-204ENST00000635299 ACIN1Q9UKV3 1341 aaKnown RBP13.23□□□□□ -0.29
LINC01427-204ENST00000635299 PIAS4Q8N2W9 510 aaPredicted RBP13.23□□□□□ -0.29
LINC01427-204ENST00000635299 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.29
LINC01427-204ENST00000635299 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
LINC01427-204ENST00000635299 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
LINC01427-204ENST00000635299 APLP2Q06481 763 aa13.14□□□□□ -0.31
LINC01427-204ENST00000635299 CENPBP07199 599 aaPredicted RBP13.14□□□□□ -0.31
LINC01427-204ENST00000635299 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
LINC01427-204ENST00000635299 BCL11AQ9H165 835 aa13.12□□□□□ -0.31
LINC01427-204ENST00000635299 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
LINC01427-204ENST00000635299 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
LINC01427-204ENST00000635299 MSH5O43196 834 aa13.06□□□□□ -0.32
LINC01427-204ENST00000635299 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
LINC01427-204ENST00000635299 GTF3C3Q9Y5Q9 886 aa13.04□□□□□ -0.32
LINC01427-204ENST00000635299 DIEXFQ68CQ4 756 aaKnown RBP13.03□□□□□ -0.32
LINC01427-204ENST00000635299 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
LINC01427-204ENST00000635299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
LINC01427-204ENST00000635299 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
LINC01427-204ENST00000635299 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
LINC01427-204ENST00000635299 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
LINC01427-204ENST00000635299 ZNF316A6NFI3 1004 aaPredicted RBP12.87□□□□□ -0.35
LINC01427-204ENST00000635299 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
LINC01427-204ENST00000635299 AMER1Q5JTC6 1135 aaPredicted RBP12.81□□□□□ -0.36
LINC01427-204ENST00000635299 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
LINC01427-204ENST00000635299 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
LINC01427-204ENST00000635299 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
LINC01427-204ENST00000635299 BAZ1AQ9NRL2 1556 aaPredicted RBP12.76□□□□□ -0.37
LINC01427-204ENST00000635299 TNIKQ9UKE5 1360 aa12.76□□□□□ -0.37
LINC01427-204ENST00000635299 CEP162Q5TB80 1403 aa12.75□□□□□ -0.37
LINC01427-204ENST00000635299 NACADO15069 1562 aa12.74□□□□□ -0.37
LINC01427-204ENST00000635299 WIZO95785 1651 aa12.73□□□□□ -0.37
LINC01427-204ENST00000635299 EEA1Q15075 1411 aa12.72□□□□□ -0.37
LINC01427-204ENST00000635299 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
LINC01427-204ENST00000635299 MIER1Q8N108 512 aa12.68□□□□□ -0.38
LINC01427-204ENST00000635299 YTHDC1Q96MU7 727 aaKnown RBP12.66□□□□□ -0.38
LINC01427-204ENST00000635299 ANP32EQ9BTT0 268 aa12.65□□□□□ -0.38
LINC01427-204ENST00000635299 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
LINC01427-204ENST00000635299 TOP2AP11388 1531 aaKnown RBP12.61□□□□□ -0.39
LINC01427-204ENST00000635299 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
LINC01427-204ENST00000635299 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
LINC01427-204ENST00000635299 MAPK8IP2Q13387 824 aaPredicted RBP12.58□□□□□ -0.4
LINC01427-204ENST00000635299 SOGA1O94964 1423 aa12.57□□□□□ -0.4
LINC01427-204ENST00000635299 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
LINC01427-204ENST00000635299 DNAJC5BQ9UF47 199 aa12.53□□□□□ -0.4
LINC01427-204ENST00000635299 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
LINC01427-204ENST00000635299 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
LINC01427-204ENST00000635299 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
LINC01427-204ENST00000635299 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
LINC01427-204ENST00000635299 RUSC2Q8N2Y8 1516 aa12.47□□□□□ -0.41
LINC01427-204ENST00000635299 FKBP8Q14318 412 aa12.47□□□□□ -0.41
LINC01427-204ENST00000635299 KIF21BO75037 1637 aa12.47□□□□□ -0.41
LINC01427-204ENST00000635299 SMARCA4P51532 1647 aa12.46□□□□□ -0.41
LINC01427-204ENST00000635299 VPS8Q8N3P4 1428 aa12.46□□□□□ -0.41
LINC01427-204ENST00000635299 CLIP1P30622 1438 aa12.44□□□□□ -0.42
LINC01427-204ENST00000635299 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
LINC01427-204ENST00000635299 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
LINC01427-204ENST00000635299 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
LINC01427-204ENST00000635299 RNF216Q9NWF9 866 aaPredicted RBP12.39□□□□□ -0.43
LINC01427-204ENST00000635299 DHX57Q6P158 1386 aaKnown RBP12.37□□□□□ -0.43
LINC01427-204ENST00000635299 SLC4A2P04920 1241 aa12.36□□□□□ -0.43
LINC01427-204ENST00000635299 CUX2O14529 1486 aa12.28□□□□□ -0.44
LINC01427-204ENST00000635299 SYNJ1O43426 1573 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms