RNA–Protein interactions for RNA: ENST00000554129.1

LINC01588-208, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 2 BASIC

Gene LINC01588, Length 2,301 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-208ENST00000554129 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
LINC01588-208ENST00000554129 CCDC180Q9P1Z9 1646 aa20.18■□□□□ 0.82
LINC01588-208ENST00000554129 ZCCHC6Q5VYS8 1495 aaKnown RBP19.38■□□□□ 0.69
LINC01588-208ENST00000554129 ABCC9O60706 1549 aa19.31■□□□□ 0.68
LINC01588-208ENST00000554129 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
LINC01588-208ENST00000554129 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.65
LINC01588-208ENST00000554129 MYO15BQ96JP2 1530 aa18.91■□□□□ 0.62
LINC01588-208ENST00000554129 NACADO15069 1562 aa18.86■□□□□ 0.61
LINC01588-208ENST00000554129 SHROOM4Q9ULL8 1493 aa18.81■□□□□ 0.6
LINC01588-208ENST00000554129 RB1CC1Q8TDY2 1594 aa18.73■□□□□ 0.59
LINC01588-208ENST00000554129 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
LINC01588-208ENST00000554129 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
LINC01588-208ENST00000554129 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC01588-208ENST00000554129 BICRAQ9NZM4 1560 aa18.21■□□□□ 0.51
LINC01588-208ENST00000554129 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
LINC01588-208ENST00000554129 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
LINC01588-208ENST00000554129 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
LINC01588-208ENST00000554129 MROH2BQ7Z745 1585 aa17.88■□□□□ 0.45
LINC01588-208ENST00000554129 BAZ1AQ9NRL2 1556 aaPredicted RBP17.85■□□□□ 0.45
LINC01588-208ENST00000554129 SMARCA4P51532 1647 aa17.79■□□□□ 0.44
LINC01588-208ENST00000554129 HRCP23327 699 aa17.77■□□□□ 0.43
LINC01588-208ENST00000554129 WIZO95785 1651 aa17.72■□□□□ 0.43
LINC01588-208ENST00000554129 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
LINC01588-208ENST00000554129 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.4
LINC01588-208ENST00000554129 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
LINC01588-208ENST00000554129 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
LINC01588-208ENST00000554129 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
LINC01588-208ENST00000554129 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
LINC01588-208ENST00000554129 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
LINC01588-208ENST00000554129 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
LINC01588-208ENST00000554129 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
LINC01588-208ENST00000554129 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
LINC01588-208ENST00000554129 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
LINC01588-208ENST00000554129 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
LINC01588-208ENST00000554129 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
LINC01588-208ENST00000554129 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
LINC01588-208ENST00000554129 CFTRP13569 1480 aa17.01■□□□□ 0.31
LINC01588-208ENST00000554129 PELP1Q8IZL8 1130 aaKnown RBP16.99■□□□□ 0.31
LINC01588-208ENST00000554129 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
LINC01588-208ENST00000554129 TRIM26Q12899 539 aaPredicted RBP16.96■□□□□ 0.31
LINC01588-208ENST00000554129 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
LINC01588-208ENST00000554129 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
LINC01588-208ENST00000554129 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
LINC01588-208ENST00000554129 NESP48681 1621 aa16.92■□□□□ 0.3
LINC01588-208ENST00000554129 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
LINC01588-208ENST00000554129 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
LINC01588-208ENST00000554129 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
LINC01588-208ENST00000554129 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
LINC01588-208ENST00000554129 FANCD2Q9BXW9 1451 aa16.79■□□□□ 0.28
LINC01588-208ENST00000554129 SYNJ1O43426 1573 aa16.78■□□□□ 0.28
LINC01588-208ENST00000554129 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
LINC01588-208ENST00000554129 CUX1P39880 1505 aa16.72■□□□□ 0.27
LINC01588-208ENST00000554129 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
LINC01588-208ENST00000554129 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
LINC01588-208ENST00000554129 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
LINC01588-208ENST00000554129 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
LINC01588-208ENST00000554129 KIF21AQ7Z4S6 1674 aa16.66■□□□□ 0.26
LINC01588-208ENST00000554129 FAM9AQ8IZU1 332 aaPredicted RBP16.65■□□□□ 0.26
LINC01588-208ENST00000554129 SOGA1O94964 1423 aa16.61■□□□□ 0.25
LINC01588-208ENST00000554129 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
LINC01588-208ENST00000554129 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
LINC01588-208ENST00000554129 DNMBPQ6XZF7 1577 aa16.58■□□□□ 0.24
LINC01588-208ENST00000554129 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
LINC01588-208ENST00000554129 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
LINC01588-208ENST00000554129 ERCC6Q03468 1493 aa16.54■□□□□ 0.24
LINC01588-208ENST00000554129 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
LINC01588-208ENST00000554129 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
LINC01588-208ENST00000554129 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
LINC01588-208ENST00000554129 EEA1Q15075 1411 aa16.47■□□□□ 0.23
LINC01588-208ENST00000554129 CSRNP3Q8WYN3 585 aa16.46■□□□□ 0.23
LINC01588-208ENST00000554129 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LINC01588-208ENST00000554129 WDR62O43379 1518 aa16.43■□□□□ 0.22
LINC01588-208ENST00000554129 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
LINC01588-208ENST00000554129 CUX2O14529 1486 aa16.42■□□□□ 0.22
LINC01588-208ENST00000554129 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
LINC01588-208ENST00000554129 ABCA10Q8WWZ4 1543 aa16.39■□□□□ 0.21
LINC01588-208ENST00000554129 ACIN1Q9UKV3 1341 aaKnown RBP16.36■□□□□ 0.21
LINC01588-208ENST00000554129 TARBP1Q13395 1621 aaKnown RBP16.35■□□□□ 0.21
LINC01588-208ENST00000554129 TDRD9Q8NDG6 1382 aaKnown RBP16.34■□□□□ 0.21
LINC01588-208ENST00000554129 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
LINC01588-208ENST00000554129 IGF1RP08069 1367 aa16.33■□□□□ 0.2
LINC01588-208ENST00000554129 MYT1Q01538 1121 aa16.32■□□□□ 0.2
LINC01588-208ENST00000554129 IFT140Q96RY7 1462 aa16.28■□□□□ 0.2
LINC01588-208ENST00000554129 PRXQ9BXM0 1461 aa16.28■□□□□ 0.2
LINC01588-208ENST00000554129 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
LINC01588-208ENST00000554129 KIF21BO75037 1637 aa16.27■□□□□ 0.19
LINC01588-208ENST00000554129 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
LINC01588-208ENST00000554129 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
LINC01588-208ENST00000554129 GAPVD1Q14C86 1478 aa16.26■□□□□ 0.19
LINC01588-208ENST00000554129 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
LINC01588-208ENST00000554129 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
LINC01588-208ENST00000554129 GOLGA3Q08378 1498 aa16.25■□□□□ 0.19
LINC01588-208ENST00000554129 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
LINC01588-208ENST00000554129 CARMIL1Q5VZK9 1371 aa16.22■□□□□ 0.19
LINC01588-208ENST00000554129 ERICH3Q5RHP9 1530 aa16.19■□□□□ 0.18
LINC01588-208ENST00000554129 TNIKQ9UKE5 1360 aa16.19■□□□□ 0.18
LINC01588-208ENST00000554129 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
LINC01588-208ENST00000554129 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
LINC01588-208ENST00000554129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
LINC01588-208ENST00000554129 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms