RNA–Protein interactions for RNA: ENST00000564448.5

CNGB1-204, Transcript of cyclic nucleotide gated channel beta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGB1, Length 4,364 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGB1-204ENST00000564448 NISCHQ9Y2I1 1504 aa20.76■□□□□ 0.91
CNGB1-204ENST00000564448 DCAF8L2P0C7V8 631 aa20.26■□□□□ 0.83
CNGB1-204ENST00000564448 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
CNGB1-204ENST00000564448 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
CNGB1-204ENST00000564448 PCGF6Q9BYE7 350 aa18.45■□□□□ 0.54
CNGB1-204ENST00000564448 EHMT2Q96KQ7 1210 aa18.42■□□□□ 0.54
CNGB1-204ENST00000564448 ABCC9O60706 1549 aa18.24■□□□□ 0.51
CNGB1-204ENST00000564448 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
CNGB1-204ENST00000564448 FAM9AQ8IZU1 332 aaPredicted RBP17.93■□□□□ 0.46
CNGB1-204ENST00000564448 TTBK1Q5TCY1 1321 aaPredicted RBP17.86■□□□□ 0.45
CNGB1-204ENST00000564448 HRCP23327 699 aa17.79■□□□□ 0.44
CNGB1-204ENST00000564448 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.43
CNGB1-204ENST00000564448 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
CNGB1-204ENST00000564448 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
CNGB1-204ENST00000564448 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
CNGB1-204ENST00000564448 CCER1Q8TC90 406 aaPredicted RBP17.63■□□□□ 0.41
CNGB1-204ENST00000564448 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
CNGB1-204ENST00000564448 MYT1Q01538 1121 aa17.51■□□□□ 0.39
CNGB1-204ENST00000564448 RANGAP1P46060 587 aaPredicted RBP17.49■□□□□ 0.39
CNGB1-204ENST00000564448 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
CNGB1-204ENST00000564448 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CNGB1-204ENST00000564448 APLP2Q06481 763 aa17.44■□□□□ 0.38
CNGB1-204ENST00000564448 LOC105371045A0A1W2PR82 267 aa17.42■□□□□ 0.38
CNGB1-204ENST00000564448 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
CNGB1-204ENST00000564448 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
CNGB1-204ENST00000564448 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
CNGB1-204ENST00000564448 ZCCHC6Q5VYS8 1495 aaKnown RBP17.14■□□□□ 0.33
CNGB1-204ENST00000564448 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
CNGB1-204ENST00000564448 RB1CC1Q8TDY2 1594 aa17.11■□□□□ 0.33
CNGB1-204ENST00000564448 SCRIBQ14160 1630 aa17.1■□□□□ 0.33
CNGB1-204ENST00000564448 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
CNGB1-204ENST00000564448 NEFLP07196 543 aa17.04■□□□□ 0.32
CNGB1-204ENST00000564448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.03■□□□□ 0.32
CNGB1-204ENST00000564448 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
CNGB1-204ENST00000564448 DIEXFQ68CQ4 756 aaKnown RBP16.98■□□□□ 0.31
CNGB1-204ENST00000564448 NACADO15069 1562 aa16.96■□□□□ 0.31
CNGB1-204ENST00000564448 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
CNGB1-204ENST00000564448 ACIN1Q9UKV3 1341 aaKnown RBP16.74■□□□□ 0.27
CNGB1-204ENST00000564448 ITGAEP38570 1179 aa16.71■□□□□ 0.27
CNGB1-204ENST00000564448 FBLN2P98095 1184 aa16.7■□□□□ 0.26
CNGB1-204ENST00000564448 BCANQ96GW7 911 aa16.66■□□□□ 0.26
CNGB1-204ENST00000564448 SCAF1Q9H7N4 1312 aaKnown RBP16.62■□□□□ 0.25
CNGB1-204ENST00000564448 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
CNGB1-204ENST00000564448 CNGB1Q14028 1251 aaPredicted RBP16.56■□□□□ 0.24
CNGB1-204ENST00000564448 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
CNGB1-204ENST00000564448 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.23
CNGB1-204ENST00000564448 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
CNGB1-204ENST00000564448 POLR3GLQ9BT43 218 aa16.44■□□□□ 0.22
CNGB1-204ENST00000564448 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
CNGB1-204ENST00000564448 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
CNGB1-204ENST00000564448 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
CNGB1-204ENST00000564448 RTL5Q5HYW3 569 aaPredicted RBP16.36■□□□□ 0.21
CNGB1-204ENST00000564448 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
CNGB1-204ENST00000564448 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
CNGB1-204ENST00000564448 ERCC6Q03468 1493 aa16.29■□□□□ 0.2
CNGB1-204ENST00000564448 CECR2Q9BXF3 1484 aa16.28■□□□□ 0.2
CNGB1-204ENST00000564448 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
CNGB1-204ENST00000564448 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
CNGB1-204ENST00000564448 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
CNGB1-204ENST00000564448 CDK11AQ9UQ88 783 aaPredicted RBP16.2■□□□□ 0.18
CNGB1-204ENST00000564448 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
CNGB1-204ENST00000564448 NPM1P06748 294 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNGB1-204ENST00000564448 FKBP8Q14318 412 aa16.15■□□□□ 0.18
CNGB1-204ENST00000564448 FAM50AQ14320 339 aaKnown RBP16.15■□□□□ 0.18
CNGB1-204ENST00000564448 MIER1Q8N108 512 aa16.12■□□□□ 0.17
CNGB1-204ENST00000564448 ANP32CO43423 234 aa16.11■□□□□ 0.17
CNGB1-204ENST00000564448 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
CNGB1-204ENST00000564448 CLSPNQ9HAW4 1339 aa16.04■□□□□ 0.16
CNGB1-204ENST00000564448 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
CNGB1-204ENST00000564448 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
CNGB1-204ENST00000564448 EIF5BO60841 1220 aaKnown RBP15.98■□□□□ 0.15
CNGB1-204ENST00000564448 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
CNGB1-204ENST00000564448 TRIM52Q96A61 297 aa15.96■□□□□ 0.15
CNGB1-204ENST00000564448 DDX10Q13206 875 aaKnown RBP15.95■□□□□ 0.14
CNGB1-204ENST00000564448 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
CNGB1-204ENST00000564448 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
CNGB1-204ENST00000564448 NBR1Q14596 966 aa15.92■□□□□ 0.14
CNGB1-204ENST00000564448 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
CNGB1-204ENST00000564448 ANP32AP39687 249 aaKnown RBP15.88■□□□□ 0.13
CNGB1-204ENST00000564448 ZNF777Q9ULD5 760 aaPredicted RBP15.87■□□□□ 0.13
CNGB1-204ENST00000564448 ANP32EQ9BTT0 268 aa15.87■□□□□ 0.13
CNGB1-204ENST00000564448 HNRNPUQ00839 825 aaKnown RBP eCLIP15.86■□□□□ 0.13
CNGB1-204ENST00000564448 IRX6P78412 446 aaPredicted RBP15.86■□□□□ 0.13
CNGB1-204ENST00000564448 ZNF326Q5BKZ1 582 aaKnown RBP15.86■□□□□ 0.13
CNGB1-204ENST00000564448 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
CNGB1-204ENST00000564448 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.13
CNGB1-204ENST00000564448 HIRIP3Q9BW71 556 aaPredicted RBP15.8■□□□□ 0.12
CNGB1-204ENST00000564448 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
CNGB1-204ENST00000564448 SMARCA4P51532 1647 aa15.78■□□□□ 0.12
CNGB1-204ENST00000564448 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
CNGB1-204ENST00000564448 FAM9BQ8IZU0 186 aa15.75■□□□□ 0.11
CNGB1-204ENST00000564448 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
CNGB1-204ENST00000564448 EEA1Q15075 1411 aa15.73■□□□□ 0.11
CNGB1-204ENST00000564448 WIZO95785 1651 aa15.73■□□□□ 0.11
CNGB1-204ENST00000564448 BCL11AQ9H165 835 aa15.73■□□□□ 0.11
CNGB1-204ENST00000564448 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
CNGB1-204ENST00000564448 CUX2O14529 1486 aa15.72■□□□□ 0.11
CNGB1-204ENST00000564448 SOGA1O94964 1423 aa15.72■□□□□ 0.11
CNGB1-204ENST00000564448 TDRD9Q8NDG6 1382 aaKnown RBP15.71■□□□□ 0.11
CNGB1-204ENST00000564448 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms