Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRIM48Q8IWZ4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 AC073869.2-201ENST00000417338 1026 ntBASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 BRD7P5-201ENST00000299197 1822 ntBASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRIM48Q8IWZ4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 USP17L6P-201ENST00000382470 1197 ntBASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 HINT2P1-201ENST00000419438 481 ntBASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 NAGK-204ENST00000443872 878 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 BEND3P1-201ENST00000421591 1944 ntBASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 AL928921.2-201ENST00000641325 2442 ntBASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRIM48Q8IWZ4 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms