Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RP1L1Q8IWN7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.84□□□□□ -0.35
RP1L1Q8IWN7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.84□□□□□ -0.35
RP1L1Q8IWN7 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RP1L1Q8IWN7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 AC064801.2-201ENST00000625052 1303 ntBASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.83□□□□□ -0.35
RP1L1Q8IWN7 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 DUX4L50-201ENST00000455245 715 ntBASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PFN2-212ENST00000490975 858 ntTSL 4 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AL359091.4-201ENST00000610052 409 ntBASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RP1L1Q8IWN7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 OR52M2P-201ENST00000414298 959 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RN7SL494P-201ENST00000461517 304 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 BCL2L12P1-201ENST00000508390 733 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC140658.4-201ENST00000561990 352 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC104581.4-201ENST00000623126 3052 ntBASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RP1L1Q8IWN7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms