Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15□□□□□ -0.01
RNF135Q8IUD6 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC15□□□□□ -0.01
RNF135Q8IUD6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 MIR1301-201ENST00000408518 82 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 HNRNPA1P27-201ENST00000412087 955 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 AC073869.2-201ENST00000417338 1026 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15□□□□□ -0.01
RNF135Q8IUD6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC15□□□□□ -0.01
RNF135Q8IUD6 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 RN7SL582P-201ENST00000491078 279 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 AC003686.1-201ENST00000550956 1034 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15□□□□□ -0.01
RNF135Q8IUD6 GOLGA2P7-209ENST00000560408 745 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC15□□□□□ -0.01
RNF135Q8IUD6 AC010976.2-201ENST00000609697 852 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 AC006483.2-201ENST00000609813 515 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15□□□□□ -0.01
RNF135Q8IUD6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 AC025183.3-201ENST00000623526 1482 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 AL354702.1-201ENST00000442006 1960 ntBASIC15□□□□□ -0.01
RNF135Q8IUD6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15□□□□□ -0.01
RNF135Q8IUD6 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF135Q8IUD6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15□□□□□ -0.01
RNF135Q8IUD6 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC015688.4-201ENST00000580780 1647 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC126335.2-201ENST00000623362 4637 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 NHP2P1-201ENST00000335274 462 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC004522.1-201ENST00000419978 654 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 RBM4-207ENST00000506523 654 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC106047.2-201ENST00000511723 743 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AC004686.1-201ENST00000605113 538 ntBASIC14.99□□□□□ -0.01
RNF135Q8IUD6 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF135Q8IUD6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RNF135Q8IUD6 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms