Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AC011498.7-201ENST00000624986 2027 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CNOT4O95628 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AC103592.1-201ENST00000394513 664 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 BANF1P3-201ENST00000412556 261 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.63□□□□□ -0.39
CNOT4O95628 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.63□□□□□ -0.39
CNOT4O95628 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.63□□□□□ -0.39
CNOT4O95628 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CNOT4O95628 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AP003419.4-201ENST00000616071 517 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 AC006453.1-201ENST00000636037 1257 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC007952.5-201ENST00000572818 1486 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.63□□□□□ -0.39
CNOT4O95628 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 AC041040.2-201ENST00000622926 2899 ntBASIC12.63□□□□□ -0.39
CNOT4O95628 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CNOT4O95628 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CNOT4O95628 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
CNOT4O95628 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CNOT4O95628 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 BEND3P1-201ENST00000421591 1944 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 RPL13AP3-202ENST00000494676 1473 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 AC026320.2-201ENST00000434379 478 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 AC073150.1-201ENST00000450406 1084 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.62□□□□□ -0.39
CNOT4O95628 AC104784.1-201ENST00000473096 294 ntBASIC12.62□□□□□ -0.39
CNOT4O95628 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CNOT4O95628 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC12.62□□□□□ -0.39
CNOT4O95628 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CNOT4O95628 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CNOT4O95628 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms