Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PCDHGC4Q9Y5F7 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC072061.1-201ENST00000569710 2234 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 TMEM198B-204ENST00000484016 896 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC009560.1-201ENST00000620208 434 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC015967.2-201ENST00000624092 234 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC006435.4-201ENST00000625037 234 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AL356737.1-201ENST00000634391 234 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCDHGC4Q9Y5F7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC005014.1-201ENST00000432006 2976 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AK2P2-201ENST00000439142 405 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 FTH1P22-201ENST00000456305 520 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 RPL18AP8-201ENST00000486071 528 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms