Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC239868.1-201ENST00000369385 493 ntBASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 MIR769-201ENST00000390225 118 ntBASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 KRT8P1-201ENST00000557533 1207 ntBASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC091544.8-201ENST00000619490 361 ntBASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 AC138627.1-207ENST00000641560 1006 ntBASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PCDH19Q8TAB3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 AL157791.1-201ENST00000553667 1699 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 AC093462.1-201ENST00000621167 1683 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SNORA50C-201ENST00000408535 133 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 RN7SL11P-201ENST00000471305 293 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 RNA5SP423-201ENST00000517127 109 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 AC106872.11-201ENST00000605838 421 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SNORA50.1-201ENST00000628590 135 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 AC009474.1-201ENST00000455096 1565 ntBASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
PCDH19Q8TAB3 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PCDH19Q8TAB3 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms